Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2479 ATGCAATTAACCAGCTCATTTTCAGAAAGTTTGTGTTGGGCTGATAAATCAGTTCCCGCCGAATCCCCAGCAGCTGCCTTCCTTGTCCGGCAAGGGCTCCATTTAAGAATAATCCTTGCACGAGCCGTTCAAGAAGAAACTCTTGACCATGAGCTGGTAAGTGACGCAGTGCGAGAGGCCATTTCCCAGGTTGTTACTTATTCGACAGAGAAAAAACGTAATTTCATTGAGACTATTGAGCTGCAAATTGGATTGAAGAACTATGACCCTCAGAAAGACAAGCGTTTCAGTGGCTCAGTTAAGCTTCCTCATATTCCTCGCCCTAAGATGAAGATTTGCATGCTTGGTGATGCTCAGCATGTGGAAGAGGTCAGTAACTCGACTGGACTACATGGATGTGGAACCGAAAAAACTTTAAACAAGAAACTCGTCAAGAAGGTTGCCAAGAAGTACCATGCATTTTTAGCGTCTGAAGATGTCATCAAGCAGATCCCTCTTCTTTTGGGCCCTGGCTTAAATAAGGCTGGCAAGTAGAAGTTTCCAACACTGGTGACTCATCAAGAATCCTTGGAGTCGAAAGTTAATGAAACAGAAGCAATGATGAAGTTTCAACTTAAGAAAGTTCTTTCTATGGGTGTTGCTGTCGGAAAATGCACAATGGAGGAGAAGCAGATCTTCCAGAACGTACAACTTAGTGCAACTGCTGGTTCTGTATAG 717 0.4365 MQLTSSFSESLCWADKSVPAESPAAAFLVRQGLHLRIILARAVQEETLDHELVSDAVREAISQVVTYSTEKKRNFIETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEVSNSTGLHGCGTEKTLNKKLVKKVAKKYHAFLASEDVIKQIPLLLGPGLNKAGKXKFPTLVTHQESLESKVNETEAMMKFQLKKVLSMGVAVGKCTMEEKQIFQNVQLSATAGSV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2479 238 Gene3D - 68 231 - -
Alju03g2479 238 SUPERFAMILY Ribosomal protein L1 56 231 IPR023674 -
Alju03g2479 238 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 60 232 - -
Alju03g2479 238 FunFam Ribosomal protein L10a 49 164 - -
Alju03g2479 238 Pfam Ribosomal protein L1p/L10e family 71 230 IPR028364 -
Alju03g2479 238 Gene3D - 113 201 IPR016095 -
Alju03g2479 238 CDD Ribosomal_L1 57 230 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2479 Alju-ChrAlju03 51352409 51359297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2479 51 234 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 76.064 1.04e-86 254