Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2445 ATGGCTATAAGGACAGTGGCCGGTTGTGCACCTGCGATATTGTTAATCGTTTTCATCTCAGCGCCTGACGGAGCCACCATGGGTCGCGTCCGCACCAAAACCGTCAAGAAGTCTTCACGCCAGGTGATCGAGAAGTACTACTCTCGAATGACATTGGACTTCCACACCAACAAGAAGATTCTTGAGGAGGTTGCTCTCATTCCATCCAAGAGACTCCGCAATAAGATTGCCGGATTCTCGACTCATCTCATGAAGAGGATCCAGAAGGGACCTGTTCGTGGAATTTCTCTCAAGCTTCAGGAGGAGGAGCGTGAACGTCGCATGGATTTCGTCCCTGACGTCTCCGCCATCAAGACCGACCAGATCGAGGTCGATAAGGAGACTCTAGACATGCTCAATGCTCTTGGTATGAATGATATTCCGGGGCTCGTCAAAGTTGATCCCGTCCCTGTGCAGCAGACCTTGGGGTTCGGTCGTGGTTTTGGAGGAGCTAGGAGGTATTAG 504 0.5139 MAIRTVAGCAPAILLIVFISAPDGATMGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLNALGMNDIPGLVKVDPVPVQQTLGFGRGFGGARRY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2445 167 Gene3D - 27 88 IPR036401 GO:0003735|GO:0005840|GO:0006412
Alju03g2445 167 ProSitePatterns Ribosomal protein S17e signature. 67 82 IPR018273 GO:0003735|GO:0005840|GO:0006412
Alju03g2445 167 FunFam 40S ribosomal protein S17 27 88 - -
Alju03g2445 167 SUPERFAMILY Rps17e-like 27 88 IPR036401 GO:0003735|GO:0005840|GO:0006412
Alju03g2445 167 Hamap 30S ribosomal protein S17e [rps17e]. 27 89 IPR001210 GO:0003735|GO:0005840|GO:0006412
Alju03g2445 167 PANTHER 40S RIBOSOMAL PROTEIN S17 27 150 IPR001210 GO:0003735|GO:0005840|GO:0006412
Alju03g2445 167 Pfam Ribosomal S17 27 146 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2445 Alju-ChrAlju03 51032199 51034069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2445 27 165 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 82.734 1.52e-79 230