Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2435 ATGAAGCTCCTTCCCTCTCTTCTCAAAACCTTAGAACCAACAAGGTCGTCTTCCTCCTCCTCCTCCTCCACCTGGTCTTGGCCTTCCTGTCACCATCCTAAAACCCTCTCTTTCCGAGCTTCCTCCTCCGACATCTTCAGAACCATCAACTCTGCTTACCTCGACCTCCCCGACGACGACGCACCCGATCCAATCGAGACCATGATTCGCGGCGGCTTGAGATCATCGGATCGTCTCTTCTTCGAGCTAGACCAAACCAGCTCCATATTAGAGGCTAAATCAGCGACGACAACCTTGACATTCAAAGACACCCTCGTACTGTCCATGGAATCCCAGGATCCCTTCGTGGATTTTCGCAAATCAATGGAGGAGATGGTGGAAGCTCACGGCGTTAAGGACTGGGACAGTCTTGAAGAGCTCTTGTGTTGGTATCTGAGGGTCAACGCTAAGAGCAATCACGGCTATATTATGGGTGCTTTCGTTGATTTGTTGCTTGTTCTTTCTTTGTCTTCTGAATCTTCTTCACTTTCTTCTGCTTCTTCTCCTCTCTCTTTGTATTCTTCTTCTTCTCCCTCTTCTTCTTCTTGTTTGGAAGCGGAGGAAGATGTTCATGTGAAGCAGGAGATTAAATGTGAAGACGAAGCCTCATCATCGTCTTCAACTGTTTGA 669 0.4798 MKLLPSLLKTLEPTRSSSSSSSSTWSWPSCHHPKTLSFRASSSDIFRTINSAYLDLPDDDAPDPIETMIRGGLRSSDRLFFELDQTSSILEAKSATTTLTFKDTLVLSMESQDPFVDFRKSMEEMVEAHGVKDWDSLEELLCWYLRVNAKSNHGYIMGAFVDLLLVLSLSSESSSLSSASSPLSLYSSSSPSSSSCLEAEEDVHVKQEIKCEDEASSSSSTV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2435 222 MobiDBLite consensus disorder prediction 9 29 - -
Alju03g2435 222 MobiDBLite consensus disorder prediction 176 201 - -
Alju03g2435 222 MobiDBLite consensus disorder prediction 176 197 - -
Alju03g2435 222 ProSiteProfiles OVATE domain profile. 107 166 IPR006458 -
Alju03g2435 222 Pfam Transcriptional repressor, ovate 111 167 IPR006458 -
Alju03g2435 222 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 31 167 IPR038933 GO:0045892
Alju03g2435 222 MobiDBLite consensus disorder prediction 10 29 - -
Alju03g2435 222 NCBIfam uncharacterized plant-specific domain TIGR01568 107 168 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2435 Alju-ChrAlju03 50986528 50987196 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju03g2435 Ovate 2.4e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1308 01 10290456 10291163 Alju03g2435 03 50986528 50987196 CCT
Alju03g2435 03 50986528 50987196 Alju01g3685 01 66339805 66340530 ECH
Alju03g2435 03 50986528 50987196 Alju03g2435 03 50986528 50987196 ECH