Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2434 ATGTCTCACCCCAGAAAGAAGCTTCATTTAAGCTCTGTTTCCGTCAAACTTGGCTGCAGCAGCTGCAGGAGACCCAAGCTTTCTCATATATTCCACCCAAAGCCTAAACCCAAGAACCCCTCTTACCATAAACACAAACTTTACAATCTTTCTTCCTCAAGCCACTACGACTCTGCCACCACCACCACCACCACCACAACTTTCTCTCCCTACGTCGACTCCTCGCACTTTTCTGACTCTGATAACTACGGGAACGCCTCGAGGACAGTCGGAGCTTTCGGCAGAGTAGGCGGTGAAGGTTTGGCGGTGGAGAAAGATTCCGACGACCCTTATCTGGATTTTAGGCACTCCATGCTTCAAATGATATTGGAGAATGAGATATACTCCAAGGAAGATCTTCGGGAACTTCTCAATTGTTTTCTTCAGCTCAATTCTCCCTACCACCATGGAGCTATAGTCAGAGCTTTCACTGAGATCTGGAATGGCGTCTTCTCTGTGAAGACCAGTTCGCCCAGATTTCACTTCAGTCGCAAGTCACGTGACTTCTGA 549 0.4791 MSHPRKKLHLSSVSVKLGCSSCRRPKLSHIFHPKPKPKNPSYHKHKLYNLSSSSHYDSATTTTTTTTFSPYVDSSHFSDSDNYGNASRTVGAFGRVGGEGLAVEKDSDDPYLDFRHSMLQMILENEIYSKEDLRELLNCFLQLNSPYHHGAIVRAFTEIWNGVFSVKTSSPRFHFSRKSRDF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2434 182 Pfam Transcriptional repressor, ovate 107 163 IPR006458 -
Alju03g2434 182 NCBIfam uncharacterized plant-specific domain TIGR01568 102 161 IPR006458 -
Alju03g2434 182 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Alju03g2434 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 165 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2434 Alju-ChrAlju03 50977977 50978525 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju03g2434 Ovate 8.3e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2434 03 50977977 50978525 Alju03g2434 03 50977977 50978525 ECH