Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2403 ATGGCCATGCAAACTGTTTATTTCAAAGAACATGAAGGCTTTGCCCACAACACCATTGGGCAATTGTCATCTGTAGCCTCAACCCCCTGGTGGACTGCCCTTGGATCTCAGACCGTTCAACAGGAGTCTTCGATACAAATGAAACCATTTTCACTGGACTTTTCCAACTATGCCGATCATCTTACTGGACCCAAGCAGCCAGCAAGAGCAGCTCATCAGGTTCTGGATAAAGGACACACAACACAGTTCACTATCTTCCCAGAAGATTGTGAGATGTCAGATGATACACAAAAGCATCAGGCAGTCATGTCACTTCTTTCATCCTCTCCGGAACCTCGTGGTCATTTTGAGATAAAATTTAGTCAGCCTATGATCTGTTCAAAATATCCTTTTATGGATCGATTTTATGGGCTCATCTCAACCTATGGACCTCAGATTCCGGGCCGTTTAATGCTGCCACTTAACTTGACATCCGATGATGGGCCAATTTATGTAAATGCTAAGCAGTACCATGGGATCATCAGACGTCGCCAGTCACGTGCAAAGGCTTTACTTGAGAATAAATTTACAAAACGCCGCAGGCCCTATATGCATGAATCACGTCACCTCCATGCAATGAGGCGACCAAGAGGGTGTGGTGGTCGCTTCTTGAACACAAGAAATCTGAAGAATGGAAATGGAAATGGTGAAAGCGGAAGCACAGTGATCAAAAATGGGGAGGGCCTATTATTCCAGTCTAGTGGTTCACAGAGTTCTGAAGTTCTGCAATCAGAGGGTGGAACTCTGAATTCATCAAAGGAAGCCAATGGCAACAGTTCAAATGTTTCGGGTTTAGAGGTGACAAGCATGTATGCACGTGGCACTTTGGATGGCTTAATTGGTCTCAATCATGTGGGGTCCTCTGTGCACTCTCTTGCAGACATGATAGATAGTGGACGTGGCATTGTTATGCCTGCGAAATGGGTTGCAGCAGCAGGTAACTGCTGCAAACTCTGA 996 0.4548 MAMQTVYFKEHEGFAHNTIGQLSSVASTPWWTALGSQTVQQESSIQMKPFSLDFSNYADHLTGPKQPARAAHQVLDKGHTTQFTIFPEDCEMSDDTQKHQAVMSLLSSSPEPRGHFEIKFSQPMICSKYPFMDRFYGLISTYGPQIPGRLMLPLNLTSDDGPIYVNAKQYHGIIRRRQSRAKALLENKFTKRRRPYMHESRHLHAMRRPRGCGGRFLNTRNLKNGNGNGESGSTVIKNGEGLLFQSSGSQSSEVLQSEGGTLNSSKEANGNSSNVSGLEVTSMYARGTLDGLIGLNHVGSSVHSLADMIDSGRGIVMPAKWVAAAGNCCKL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2403 331 ProSiteProfiles NF-YA/HAP2 family profile. 159 219 IPR001289 GO:0003700|GO:0006355
Alju03g2403 331 MobiDBLite consensus disorder prediction 219 275 - -
Alju03g2403 331 MobiDBLite consensus disorder prediction 208 275 - -
Alju03g2403 331 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 31 280 IPR001289 GO:0003700|GO:0006355
Alju03g2403 331 SMART cbf3 158 219 IPR001289 GO:0003700|GO:0006355
Alju03g2403 331 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 162 216 IPR001289 GO:0003700|GO:0006355
Alju03g2403 331 PRINTS CCAAT-binding transcription factor subunit B signature 193 216 IPR001289 GO:0003700|GO:0006355
Alju03g2403 331 PRINTS CCAAT-binding transcription factor subunit B signature 162 184 IPR001289 GO:0003700|GO:0006355
Alju03g2403 331 Gene3D - 160 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2403 Alju-ChrAlju03 50688425 50691939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2403 1 331 CCAAT-HAP2 Transcription Factor Family AT3G05690 41.477 1.02e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Alju03g2403 CBFB_NFYA 1.6e-24 No_clan