Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2402 ATGAGCAATAACAGCACAGATAGTTACTCAGGATTCCTTGGATCCAACAACATAAGTGGGATCGGGTATGGCATAGGAATATCAAGTGGGATTCTGCTGCTCATCACCACCATCACCCTCACCTCCTATTTCTGCACTAGAACACAGTCGCCGCCATCTTCGCCCTCCGCCGCCTCCTCCTCCTCGGCTTCTCGGAGAAATCTCCCGACGTTCCTTGAGCCGCATCACACTGTGGTGGTGGATGTGGGGATAGACGAAGCCGCCATTCTGAGCTACCCCAAGCTGCTGTATTCTGAGGCCAAGCTGCAAAAGCCAGATTCCACAGGGACATGCTGCTCCATATGCCTGGGAGATTATAAAAGCAGGGATATGCTTCGGGAGCTACCGGATTGTGGCCATATATTTCACCTCAAGTGCATTGATCCATGGCTCAGATTGCATCCAACATGTCCTCTCTGCAGAACATCTCCTGTCCCAACACCACTAGCAACGCCTCTCTCCGAGGTCGTTCCATTGACCACCTGGCCCTACCTACCATAA 540 0.5222 MSNNSTDSYSGFLGSNNISGIGYGIGISSGILLLITTITLTSYFCTRTQSPPSSPSAASSSSASRRNLPTFLEPHHTVVVDVGIDEAAILSYPKLLYSEAKLQKPDSTGTCCSICLGDYKSRDMLRELPDCGHIFHLKCIDPWLRLHPTCPLCRTSPVPTPLATPLSEVVPLTTWPYLP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2402 179 SMART ring_2 112 153 IPR001841 -
Alju03g2402 179 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 168 IPR045899 -
Alju03g2402 179 CDD RING-H2_EL5-like 111 154 - -
Alju03g2402 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 159 IPR013083 -
Alju03g2402 179 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Alju03g2402 179 Pfam Ring finger domain 112 154 IPR001841 -
Alju03g2402 179 SUPERFAMILY RING/U-box 99 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2402 Alju-ChrAlju03 50679412 50679951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2402 9 178 C3H Transcription Factor Family AT5G06490 49.733 7.33e-56 173