Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2397 ATGGGAAACAACTGTGTCTGTTTTGGATCGAGAACTTCAAAGAATAGAGAAGTTCCCCAGGTTTCGAATTCAGATGGGTGTTGTACTCGATTCATAAACCTTATACTTTCCAATAACCGCAAAGCGAATGCAAATGCGAATGCGAATGCGAATGCGAATGCGAATGCGAATGCGAACGGGAATGCAAATGCAATACCATGCAATAATGAGCCAAATTCCATCGACATTGTAGCCGGCAAGCCTCCAGAGGTACCCAAAATTGAAAAGGACGAGCCAAAACCAGTACCTGATGAGAATGCCACAAAAAAAGACCAAGTCCCAGACTCTAAAAGGCGCGTGGAGGAGTCAAGGTTCGTAGAAGAAGCATCAACTTCAAGAACAACAACACAGAAAGCAACATCTGCAGAACCAAAGAGGCCCTACAATGTGAAGAGGCAAGCAGTGGCAGGGCTTAAAGCAGAGTCTGTATTGCAAACAAAAACAGGAAATCTGAAGGAATTCTACACTTTGGGAAGGAAGCTTGGAAACGGACAATTCGGGACAACATTTCTTTGTGTGGAGAAGGACACAGGAAAAGAGTATGCTTGCAAGTCAATAGCCAAGAGGAAACTGAAAAATGAGGAAGATGTGGAGGATGTGAGGAGGGAGATTCGGATAATGCATCACTTGGCAGGGTGTCCTGATGTGATATCCATAAAAGGGTCTTACGAGGATGCCGTGGCTGTTCATGTTGTGATGGAACTATGTTCAGGTGGTGAGTTGTTTGATAGGATTGTGCAGAGAGGGCATTACAGTGAGAGAAAAGCAGCTCAAATAGCAAGGACTATAGTTGGTGTCATTGAAGCTTGTCACTCACTTGGAGTAATGCATCGCGATCTTAAGCCTGAGAATTTTCTCTTCATTAATGAGCACGAAGATTCTCCCCTTAAGGCCATCGATTTTGGCTTGTCTACTTTCTTCAAACCAGGGGATATATTTAGGGACGTGGTAGGAAGTCCATACTACGTTGCACCAGAAGTCCTAAAGAAGCGTTATGGTCCAGAAGCTGATGTGTGGAGTGCTGGCGTCATCATATACATTCTGTTAAGTGGGGTGCCTCCGTTTTGGGCTGAATCGGAGGAACATATATTTAACGAGGTATTGCACAGGGAGATTGATTTCAAGTCAGATCCCTGGCCTAATATTTCTGTAAGTGCAAAGGACTTGGTCAGGAAGATGCTCGATAGAGATCCAAGCAAGAGATTGACAGCCCATGAAATCCTTTGCCATCCTTGGATCCGGGTTGATGGATCTGCTCCGGATAAGCCTCTTGACCCTGCAGTTCTAACTCGCCTGAAGCAGTTTTCTGCAATGGACAAACTCAAAAAAATGGCTCTTAGGGTTATTGCAAAGAACCTGTCGGAAGAAGAAATAGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATTAGTTTTGAAGAACTCAAGGCTGGATTGAAAGCCTTTGGGGCTAACATCGATGAATCTGAGATTCACAGTCTAATGCAAGCAGCAGACGTGGACAATAGTGGGACATTAGACTACACGGAATTCATTACAGCAACATTGAATCTGAACAAAGCCTGGAGAGAAGATAACTTAGTGGCAGCTTTCCATTATTTTGACAAAGATGGAAGTGGCTACATCACTCAGGACGAACTGCAACAAGTTTGTGAAGAATTTGGTCTGGAGAATGTTCGCTTGGAGGACATCATCCGTGAAGCTGATCAAAATAATGATGGCCGTATAGACTACAGTGAATTTGTGGCAATGATAGAGGGAAACAAAGCAGATATGGCTAAGAAGGGTGTAAAGGGGAAAAGTTAG 1863 0.4369 MGNNCVCFGSRTSKNREVPQVSNSDGCCTRFINLILSNNRKANANANANANANANANANGNANAIPCNNEPNSIDIVAGKPPEVPKIEKDEPKPVPDENATKKDQVPDSKRRVEESRFVEEASTSRTTTQKATSAEPKRPYNVKRQAVAGLKAESVLQTKTGNLKEFYTLGRKLGNGQFGTTFLCVEKDTGKEYACKSIAKRKLKNEEDVEDVRREIRIMHHLAGCPDVISIKGSYEDAVAVHVVMELCSGGELFDRIVQRGHYSERKAAQIARTIVGVIEACHSLGVMHRDLKPENFLFINEHEDSPLKAIDFGLSTFFKPGDIFRDVVGSPYYVAPEVLKKRYGPEADVWSAGVIIYILLSGVPPFWAESEEHIFNEVLHREIDFKSDPWPNISVSAKDLVRKMLDRDPSKRLTAHEILCHPWIRVDGSAPDKPLDPAVLTRLKQFSAMDKLKKMALRVIAKNLSEEEIAGLKEMFKMIDTDNSGQISFEELKAGLKAFGANIDESEIHSLMQAADVDNSGTLDYTEFITATLNLNKAWREDNLVAAFHYFDKDGSGYITQDELQQVCEEFGLENVRLEDIIREADQNNDGRIDYSEFVAMIEGNKADMAKKGVKGKS 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2397 620 CDD STKc_CAMK 167 425 - -
Alju03g2397 620 ProSitePatterns Protein kinases ATP-binding region signature. 174 201 IPR017441 GO:0005524
Alju03g2397 620 ProSitePatterns EF-hand calcium-binding domain. 588 600 IPR018247 -
Alju03g2397 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Alju03g2397 620 MobiDBLite consensus disorder prediction 73 139 - -
Alju03g2397 620 Pfam Protein kinase domain 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2397 620 MobiDBLite consensus disorder prediction 82 121 - -
Alju03g2397 620 ProSitePatterns EF-hand calcium-binding domain. 518 530 IPR018247 -
Alju03g2397 620 Gene3D - 433 609 - -
Alju03g2397 620 Gene3D Phosphorylase Kinase; domain 1 170 253 - -
Alju03g2397 620 ProSiteProfiles EF-hand calcium-binding domain profile. 541 576 IPR002048 GO:0005509
Alju03g2397 620 ProSitePatterns EF-hand calcium-binding domain. 554 566 IPR018247 -
Alju03g2397 620 SUPERFAMILY Protein kinase-like (PK-like) 167 427 IPR011009 -
Alju03g2397 620 Gene3D Transferase(Phosphotransferase) domain 1 254 432 - -
Alju03g2397 620 PANTHER SERINE/THREONINE-PROTEIN KINASE 157 600 - -
Alju03g2397 620 ProSiteProfiles EF-hand calcium-binding domain profile. 579 610 IPR002048 GO:0005509
Alju03g2397 620 SMART serkin_6 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2397 620 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Alju03g2397 620 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Alju03g2397 620 SUPERFAMILY EF-hand 465 604 IPR011992 -
Alju03g2397 620 FunFam Calcium-dependent protein kinase 1 434 608 - -
Alju03g2397 620 Pfam EF-hand domain pair 546 604 IPR002048 GO:0005509
Alju03g2397 620 Pfam EF-hand domain pair 474 534 IPR002048 GO:0005509
Alju03g2397 620 ProSiteProfiles EF-hand calcium-binding domain profile. 505 540 IPR002048 GO:0005509
Alju03g2397 620 FunFam Calcium-dependent protein kinase 1 170 253 - -
Alju03g2397 620 FunFam Calcium-dependent protein kinase SK5 254 438 - -
Alju03g2397 620 MobiDBLite consensus disorder prediction 122 136 - -
Alju03g2397 620 ProSiteProfiles Protein kinase domain profile. 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2397 620 SMART efh_1 545 573 IPR002048 GO:0005509
Alju03g2397 620 SMART efh_1 509 537 IPR002048 GO:0005509
Alju03g2397 620 SMART efh_1 473 501 IPR002048 GO:0005509
Alju03g2397 620 SMART efh_1 579 607 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2397 Alju-ChrAlju03 50646433 50648934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2397 84 605 EF-hand Containing Proteins AT3G10660 71.619 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju03g2397 Pkinase 1.5e-73 CL0016