Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2388 ATGAGAACGTACGATATGGGTGGCAAGGGGAGGGATGCTCCACTGGATGGGGCAAGATTGTATTTGAGCTGGCCTCTAGAAACACATATATCACAAAGGCACGCTATAAGCCTCTCTCTCTCGAGGTCTTGTCTTCTGCTTAGGCCTGAAACGGTGAGAGTGGTGGAGATGGAGAAAGCAAATACGTGCGGGCTGGCGAGAACGAAATCGGATCAGCTGGTGGAGGCTCTGAAGTCGCCGACGTCGAGTGAATCGATGGGGGTGGTGATGGAGCAGGGCGGAGCAACGCCGTCGAGGAAGTCGAGTTGGCGGATGACGGGGGCGTCGCCGGGGAGAAGCGGAGGAGGGAAGAACACGCACATAAGGAAGTCGATGAGCGCGCAGCTGAAGTTTGAGCTGGATGAGGTGAGCAGCGGCGCGGCTCTTAGCCGAGCCTCGAGTGCCAGCTTGGGCCTGTCTTTCTCCTTCACCGGCTTCACTCTTCCTCCCGATGAAATCGCCGACTCCAAGCCCTTCAGCGACGACGATATCCCGGAGGATATTGAATCTGGAGCTGATAAGCCAAAACTTCAAACTGAACCCACTCTGCCCATTTATCTCAAGTTCAGGGAGGTGAGTTACAAGGTGGTGATCAGAGGCATGACATCAACGGAGGAGAAGGAGATATTAAATGGGATAAGTGGTTGCGTAAATCCAGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACAACTCTCCTAAATCTTCTTGGAGGCAGGCTGAGTCAGAGTCAGCCCACTGTAAGTGGTCCCATCACTTACAATGACCAACCTTATTGCAAGTTCTTGAAGAGCAGGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAAGGAAACACTGACGTACGCGGCACTCCTGAGATTGCCAAAGACAACCACCAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTCGGCTTGGAGAGGTGCCAAGACACGATGATTGGCGGTTCTTTTGTCCGTGGAGTATCTGGGGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTTGACGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTGAGAACTGTTCAGATGCTACAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAACCATCTAGCAGACTCTTCCACAAATTCGATAAGTTGATCCTACTAGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGACGCAATGCTTTACTTCCGATCTATAGGATGTTCACCTCTTATTGCCATGAACCCCGCAGAGTTTTTGCTGGACCTTGCCAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGAGGATAAAGTACAGATGGGAAATTCAACAATTGAAACCCGGAATGGGAAACCATCGCCTGCACTTGTACATGAGTATCTGGTGGAGGCCTATGAGACTCGAGTTGCAGAAATAGAGAAGAAAAAGCTAATGGATCCTATCCCCCTTGATGAAGAAGTGAAGACCAAGGTTTCTTCTCCTAAAAGACAATGGGGTGCGACCTGGTGTGAGCAATATTCCATACTGTTCTGGAGGGGAATCAAAGAGCGAAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCGACTGCAATCATCTTAGGATTACTTTGGTGGCAATCAGATGCCACCACACCAAAGGGTCTTCAGGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCAGTGTTCACTGCAATATTTACCTTTCCACAAGAGAGAGCCATGCTAAATAAGGAACGTGCAGCTGATATGTACAGACTAAGTGCATACTTCTTAGCTAGGACTACAAGTGACCTTCCATTGGATTTGATGTTACCAGTGCTATTCCTCCTTGTTGTTTATTTCATGGCTGGTTTGAGAGTGAGCGCAGCTCCATTTTTTCTCAGCATTCTCACTGTTTTCCTCTGCATCGTGGCGGCTCAGGGACTTGGACTTGCCATTGGGGCCACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTTACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAGAGTCCCTGTATTTATATCTTGGATTCGGTACATGTCATTCAACTACCACACATATAAACTTCTATTGAAGGTGCAATATGAGCATATAACACCAAATGTAAATGGGATGAGAATTGACAGTGGCTGGACGGAGGTGGCTGCTCTGATAGCCATGGTTTTTGGTTATCGTTTCTTGGCTTACCTTTCTTTGCGATGGATGAAACTTCAGTGA 2388 0.4724 MRTYDMGGKGRDAPLDGARLYLSWPLETHISQRHAISLSLSRSCLLLRPETVRVVEMEKANTCGLARTKSDQLVEALKSPTSSESMGVVMEQGGATPSRKSSWRMTGASPGRSGGGKNTHIRKSMSAQLKFELDEVSSGAALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIESGADKPKLQTEPTLPIYLKFREVSYKVVIRGMTSTEEKEILNGISGCVNPGEVLALMGPSGSGKTTLLNLLGGRLSQSQPTVSGPITYNDQPYCKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRTVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASDAMLYFRSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNSTIETRNGKPSPALVHEYLVEAYETRVAEIEKKKLMDPIPLDEEVKTKVSSPKRQWGATWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDATTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLMLPVLFLLVVYFMAGLRVSAAPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPVFISWIRYMSFNYHTYKLLLKVQYEHITPNVNGMRIDSGWTEVAALIAMVFGYRFLAYLSLRWMKLQ 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2388 795 Pfam ABC-2 type transporter 543 752 IPR013525 GO:0016020|GO:0140359
Alju03g2388 795 Gene3D - 199 440 IPR027417 -
Alju03g2388 795 SMART AAA_5 232 425 IPR003593 GO:0016887
Alju03g2388 795 Pfam ABC transporter 223 376 IPR003439 GO:0005524
Alju03g2388 795 ProSitePatterns ABC transporters family signature. 348 362 IPR017871 GO:0005524|GO:0016887
Alju03g2388 795 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 200 448 IPR003439 GO:0005524
Alju03g2388 795 CDD ABCG_EPDR 197 430 - -
Alju03g2388 795 MobiDBLite consensus disorder prediction 168 187 - -
Alju03g2388 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 436 IPR027417 -
Alju03g2388 795 MobiDBLite consensus disorder prediction 165 189 - -
Alju03g2388 795 Pfam ABC-2 type transporter 405 466 IPR043926 GO:0140359
Alju03g2388 795 FunFam ABC transporter G family member 22 210 442 - -
Alju03g2388 795 MobiDBLite consensus disorder prediction 78 120 - -
Alju03g2388 795 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 173 786 - -
Alju03g2388 795 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2388 Alju-ChrAlju03 50589970 50599050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2388 166 488 Calmodulin-binding Proteins AT2G36910 27.964 3.29e-15 78.2