Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2387 ATGGGCAACGTCTGTGTGGGACCTAACCTTGGAGGGAATGGATTCTGGCAATCATTCGCATCCGCTTTCAAGAAAAACCCGCCACCGGAGGGCAGGCTTCCGGGGCCTAACGCCGACAAGGACGACAATGAAAGCACGGAAAATGATGCTGGGCCTAGTTCATCTAATAAAGATTCTGACGCTCCAAATCAAGTTCAAAGTACGCCACCTGAATTGGTGAAAATTTCCAGCGATGAAAAACCAAAACCAAAACCAAAACCACCACCACCACCACCACTCGAAAAGCCTGCAAAACCCGAGGTCAATGAACCTTCTTGTAGTACTTATGCTAGGAAAGATAAAATTCCTGCTGAGCCGGAGGTGGTCAATAATGAACCTGCTTCTAATAATAACACTGCTCATGTTAGGGAGCCTGAAAGGCCTGCTAAGCCGGAGGTGGTGGCCGACGAAGCTTCCTCTAGCAATACCGCTAAAGCTGGTGAAGATAAAAAGAAGCCTACCCATGTTAAAAGATTATCGAGCATGGGACTTAGAATAGAATCGGTGTTAGGGAGGAAAACTGGGAATATAAAGGATTTTTATAGTTTGGGTCGGAAGCTAGGAGAAGGGCAGTTTGGGACAACATATTTTTGTCTAGAGAAGGCAACTGGGAAAGAGTTTGCTTGTAAATCAATTCTTAAGATAAAATTGAACACACAAGAGGACGTAGACGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGAAAGGTCATCCCAATGTGATTCAGATAGTTGATGCTTATGAAGATGCTGTGGCTGTTCATGTGGTTATGGAATACTGTGCTGGTGGAGAGCTTTTTGACAGGATCACACAGAGAGGTCACTACACTGAGAAAAAGGCAGCTGAGCTTGCAAAGGTAATTGTTGGTGTGGTTGAGGCATTCCATTCTATGGGGGTCATGCACCGAGACTTGAAGCCAGAGAACTTCCTGTTCGTCAGCCCAGAGGAAGACTCACAGCTTAAGACAATAGATTTCGGCCTCTCTGTGTTCTTTAAAACAGGTGAAACATTTACGGATGTGGTTGGGAGCCCCTATTATGTGGCACCTGAAGTTTTGAAGAAGTTCTATGGTCGAGAATGTGATGTGTGGAGTGCAGGGGTGATCATTTATATCTTATTGAGTGGACTTCCCCCATTTTGGGGCGAATCAGAGTTAACCATCTTTAAGCAAGTTTTAGAAGAAGACCTTGACCTTGTCTCTGAGCCATGGCCTAGCATATCTGCAAGTGCAAAGGATCTTCTTCGAAAAATGCTAATGAAAAACCCTAAGAAGCGACTATCGGCACGTGAAGTTCTTAGTCATCCTTGGTTTCAGATTGAAGGTTTTGCTCTTGATAAACCCCTTAACTCTGTTGTTTTAACTCGTTTGAAGCAATTTTCCACCAGGGACAAGTTCAAAAAGATAGCGATCCGAGTAATTGCTGAAAGTCTGTCAGAGGATGAAATTGCTGGGTTGAAAGAAATGTTCAGGGCAATAGACACGGATAATAGTGGACACATCACTCGTGAGGAACTAAAAGTTGGTTTGGAGAAAGTGGGTGCTTTCCTGAAGGATTCCGAAATCAATCGGTTAATGCAGTCGGCAGACACAGATAATAGTGGCACAATAGACTATGGTGAATTCTTAGCAGCTATGCTTCATGAAACCAAACTCCAAGAGAAGGATCATCTATATACTGCCTTCACCTATCTTGACAAAGATGGTAGCGGGTACATTACGCGAGATGAGCTCCAACAAGCATTTCTACAGTTTGGTCTGCAAGATATTCAATTAGATGATATAATCCGCGAAGTTGACAAGGATAATGATGGGCGCATTGATTATAATGAGTTTGTTGCAATGATGCAAGACTCTAGTTTGTAG 1908 0.4361 MGNVCVGPNLGGNGFWQSFASAFKKNPPPEGRLPGPNADKDDNESTENDAGPSSSNKDSDAPNQVQSTPPELVKISSDEKPKPKPKPPPPPPLEKPAKPEVNEPSCSTYARKDKIPAEPEVVNNEPASNNNTAHVREPERPAKPEVVADEASSSNTAKAGEDKKKPTHVKRLSSMGLRIESVLGRKTGNIKDFYSLGRKLGEGQFGTTYFCLEKATGKEFACKSILKIKLNTQEDVDDVRREIQIMHHLKGHPNVIQIVDAYEDAVAVHVVMEYCAGGELFDRITQRGHYTEKKAAELAKVIVGVVEAFHSMGVMHRDLKPENFLFVSPEEDSQLKTIDFGLSVFFKTGETFTDVVGSPYYVAPEVLKKFYGRECDVWSAGVIIYILLSGLPPFWGESELTIFKQVLEEDLDLVSEPWPSISASAKDLLRKMLMKNPKKRLSAREVLSHPWFQIEGFALDKPLNSVVLTRLKQFSTRDKFKKIAIRVIAESLSEDEIAGLKEMFRAIDTDNSGHITREELKVGLEKVGAFLKDSEINRLMQSADTDNSGTIDYGEFLAAMLHETKLQEKDHLYTAFTYLDKDGSGYITRDELQQAFLQFGLQDIQLDDIIREVDKDNDGRIDYNEFVAMMQDSSL 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2387 635 SUPERFAMILY EF-hand 492 631 IPR011992 -
Alju03g2387 635 SMART efh_1 571 599 IPR002048 GO:0005509
Alju03g2387 635 SMART efh_1 605 633 IPR002048 GO:0005509
Alju03g2387 635 SMART efh_1 535 563 IPR002048 GO:0005509
Alju03g2387 635 SMART efh_1 499 527 IPR002048 GO:0005509
Alju03g2387 635 SMART serkin_6 194 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2387 635 MobiDBLite consensus disorder prediction 48 73 - -
Alju03g2387 635 ProSiteProfiles Protein kinase domain profile. 194 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2387 635 Gene3D Phosphorylase Kinase; domain 1 196 279 - -
Alju03g2387 635 ProSitePatterns Protein kinases ATP-binding region signature. 200 227 IPR017441 GO:0005524
Alju03g2387 635 ProSitePatterns EF-hand calcium-binding domain. 614 626 IPR018247 -
Alju03g2387 635 ProSiteProfiles EF-hand calcium-binding domain profile. 605 635 IPR002048 GO:0005509
Alju03g2387 635 SUPERFAMILY Protein kinase-like (PK-like) 192 453 IPR011009 -
Alju03g2387 635 CDD STKc_CAMK 193 451 - -
Alju03g2387 635 ProSitePatterns EF-hand calcium-binding domain. 580 592 IPR018247 -
Alju03g2387 635 PANTHER SERINE/THREONINE-PROTEIN KINASE 186 626 - -
Alju03g2387 635 FunFam Calcium-dependent protein kinase 1 460 634 - -
Alju03g2387 635 Pfam EF-hand domain pair 570 631 IPR002048 GO:0005509
Alju03g2387 635 Pfam EF-hand domain pair 500 560 IPR002048 GO:0005509
Alju03g2387 635 Gene3D Transferase(Phosphotransferase) domain 1 280 457 - -
Alju03g2387 635 FunFam Calcium-dependent protein kinase 5 280 460 - -
Alju03g2387 635 Pfam Protein kinase domain 194 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2387 635 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Alju03g2387 635 Gene3D - 459 633 - -
Alju03g2387 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Alju03g2387 635 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Alju03g2387 635 ProSiteProfiles EF-hand calcium-binding domain profile. 531 566 IPR002048 GO:0005509
Alju03g2387 635 FunFam Calcium-dependent protein kinase 1 196 279 - -
Alju03g2387 635 ProSiteProfiles EF-hand calcium-binding domain profile. 567 602 IPR002048 GO:0005509
Alju03g2387 635 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Alju03g2387 635 MobiDBLite consensus disorder prediction 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2387 Alju-ChrAlju03 50578440 50582036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2387 1 635 EF-hand Containing Proteins AT2G38910 62.520 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju03g2387 Pkinase 9.8e-74 CL0016