Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2375 ATGATGGATATCAACTCGGTTGTCCAAGATATTCGTACAATGACTAAGTTTATAGATATTATTGAGCCTCTTTTTGAAATTTCCAGTTTGGATTAGGTTTTCTGCTCATACATAGACGTAGTTGCCCCGTCTGAGCTGCAAAGCATAGCCGCCAAGTGCTCTGTGTCTTCGCTCAAAGCACAAGTTCTCATGGCTGCTGCGGTGGCAATTCCTCCTGAAGCGACCACGAGTATAGACCCGACGCAGATCGAGGTGAAGCTCTTTAACAGGTGGACCTTCGATGACGTTCAGGTTAATGATATCTCTTTGGCTGATTATATTGGAGTGGCCCCATCCAAGCATGCAACATATGTTCCCCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAAGCACAGTGTCCAATAGTTGAGAGGCTTACTAATTCTCTCATGATGCATGGTAGAAACAATGGGAAGAAACTAATGGCAGTGAGGATTATTAAACATGCCATGGAAATTATCCACCTTCTAACCGATCAGAATCCTATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGATCTGCTGGTGTTGTGAGGAGACAGGCTGTGGATATCTCACCTCTTCGCCGTGTTAATCAGGCTATCTATCTTCTAACTACCGGTGCCCGCGAATCTGCATTCAGAAATATAAAGACCATTGCTGAATGCTTGGCTGATGAACTTATCAATGCAGCAAAGGGGTCATCCAACAGCTATGCAATCAAGAAAAAAGACGAGATTGAAAGAGTTGCCAAGGCAAATCGTTAA 822 0.4392 MMDINSVVQDIRTMTKFIDIIEPLFEISSLDXVFCSYIDVVAPSELQSIAAKCSVSSLKAQVLMAAAVAIPPEATTSIDPTQIEVKLFNRWTFDDVQVNDISLADYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2375 273 Gene3D Ribosomal protein S7 domain 67 273 IPR036823 -
Alju03g2375 273 Pfam Ribosomal protein S7p/S5e 127 273 IPR023798 -
Alju03g2375 273 NCBIfam 30S ribosomal protein S7 84 273 IPR005716 GO:0003735|GO:0006412|GO:0015935
Alju03g2375 273 PANTHER RIBOSOMAL PROTEIN S7 64 273 IPR000235 GO:0006412
Alju03g2375 273 CDD uS7_Eukaryote 86 273 IPR005716 GO:0003735|GO:0006412|GO:0015935
Alju03g2375 273 ProSitePatterns Ribosomal protein S7 signature. 139 165 IPR020606 GO:0003723|GO:0003735|GO:0006412
Alju03g2375 273 SUPERFAMILY Ribosomal protein S7 86 273 IPR036823 -
Alju03g2375 273 FunFam 40S ribosomal protein S5 69 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2375 Alju-ChrAlju03 50476647 50481824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2375 64 273 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 86.190 2.10e-134 376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2375 03 50476647 50481824 Alju03g2375 03 50476647 50481824 ECH