Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2371 ATGCGTATCACTGAATCTGAGAAGGTGCCTACTCTTTACATAAAGGCACTTGTGACGTTGGAAGACTTCCTCACGCAGGCTTTAGCAAATAAGGATGCCAAAAAGAAGATGAGTAGCAGTAATGCTAAAGCATTGAACTCAATGAAGCAGAAATTGAAGAAGAATAATAAGCAATATGAGGATTTGATTACTAAATATAGAGAAAATCCTGAGACTGAGGACAAAGATGAAGAGGAGACTGAGGATGAGGATGAAAGTGAGGAGGAGGTAATTGAGGAGATTGATAAGATCCAAAAGTCAGATTCTGAAGATGGCGACCAAGATGGTGAGAAGTCAGATGCAATTGATACCCCTTGGGACCAAAAACTCAGCAAGAAAGACAGGCTTATGGATAGGCAATTTATGAAAGACCCTAGTGAGATCTCTTGGGACATGGTTAACAAGAAGTTCAAAGAGGTTGTGGCTGCTAGGGGCAGGAGGGGAACGGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCTTAACAAAAGTTGCCAAAACTCCTGCACAGAAGCTGGAAATATTTTTCAGTGTTGTTTCTGCTCAATTTGATGTTAATCCTGGTTTAAATGGGCATATGCCTATTAATGTGTGGAAGAAATGCGTGCAGAATATGATGGTCATTCTTGATATTCTAGTGCAGTACCCAAACATAGTTGTTGATGATACACTGGAGCCTGATGAGAATGAAACTCAGAAGGGTGCTGACCATAGTGGACCAATTCGGGTATGGGGAAACTTAGTTGCATTCCTAGAAAGAATTGATGCTGAGTTTTTCAAGAGCTTGCAATGCATTGATCCTCATACTCGCGAATATGTTGAGAGACTTAGGGATGAGCCCATGTATCTGGCTCTTGCTCAGAATGTCCAGGATTATCTTGAAAGGGTTGGAGATTTTAAAGCTTCGTCAAAGGTAGCCCTTAAACGTGTTGAACTCATCTATTACAAACCACAGGAGGTTTATAATGCCATGAGGAAATTGGCTGAACTGACAGATGACAATAATGGAGAGGTGGATGATGAGTCTAAAGGGTTTGAGGATACGAGGACTCCTACTGCATTTGTTGTAACTCCTGAGCTTGTTCCTCGAAAATCTACTTTCCCAGAGAATAGTAGGACACTAATGGACTTATTGGTGTCCCTGATATACAAGTATGGGGATGAGCGGACGAAGGCACGTGCTATGCTTTGTGATATATATCACCATTCTCTTCTGGATGAGTTCTCAACTGCCCGTGATCTTTTGCTCATGAGCCATTTGCAGGACAGTGTTCAGCTTATGGACATATCGACGCAGATACTCTTTAACAGGGCCATGTCACAGCTAGGTCTTTGTGCTTTTCGGGTTGGGCTGATTTCTGAGGCTCATGGCTGTCTCTCTGAATTATATTCTGGTGGAAGGGTGAAGGAGCTGCTTGCTCAAGGTGTCTCTCAAAGTCGCTATCATGAGAAGACTCCAGAGCAGGAAAGGTTGGAAAGGAGACGACAGATGCCATATCATATGCACATTAACCTCGAGCTCCTGGAATCAGTGCATCTTATATGTGCTATGCTTTTGGAAGTTCCCAACATTGCAGCTAATGACCATGATGCAAAGCGTAAAGTTATTAGCAAGACTTTCCGTCGCTTGCTTGAGGTCAGTGAGAAACAAACATTTACAGGTCCTCCTGAAAATGTCAGAGATCATGTCATGGCTGCTACAAGGGCCCTTAACAAGGGAGACTTCCATAAGAGTTATGATATTATCAAGTCGCTGGATGTCTGGAAATTTGTTAGAAATCATGACAGGGTTCTGGAAATGCTTAAGGAAAAGATCAAGGAGGAGGCACTAAGGACTTACCTCTTTACCTTCTCTTCATCCTATGACTCTTTGAGCCTTGAGCAACTCACAAAAATGTTTGACCTCTCTGTTCCTTGCATCCATAGCATAGTTAGTAGGATGATATTAAATGAGGAGTTGCATGCAAGCTTGGATGAACCATCTGGCTGCATTATTTTCCAGGATGTAAAGCACTCTAGATTGCATGCTTTGGCCTTCCAGTTTACGGAGAAGTTTTCTATCATTGCAGAGAGTAATGAAAGAGCAATGGAGGCAAGGATAGGTGGCGGTGGACTTGATCTTCCCCTAAGGCGACGAGATAGCCAGGATTATGCTGCCGCTGCTGCAACAACAACAGTTGGCGGTAGGTGGCAAGACTTGTCAATTACTCAGACAAGGCAAGGCAGCGGTACCGGACGGGCAGGATATAGTATTGGTGGTGGAAGGCCTTTAACGTTGAGCCAAAATGGCTACACAAGGGACCGAACAGGAAGAGGAGCAGGTGGAGGCTATCAGAGTACAAGATATCAAGACTCTGCATATGGGGGTTCGGGGAGGACAACTCAGGGTTCAGCACTCAGGGGAGCCCAAGTGGATACATCTACTCGTATGGTTAGCCTTAAAGGAGTTCGTGCTTAA 2496 0.4391 MRITESEKVPTLYIKALVTLEDFLTQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLITKYRENPETEDKDEEETEDEDESEEEVIEEIDKIQKSDSEDGDQDGEKSDAIDTPWDQKLSKKDRLMDRQFMKDPSEISWDMVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQFDVNPGLNGHMPINVWKKCVQNMMVILDILVQYPNIVVDDTLEPDENETQKGADHSGPIRVWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPMYLALAQNVQDYLERVGDFKASSKVALKRVELIYYKPQEVYNAMRKLAELTDDNNGEVDDESKGFEDTRTPTAFVVTPELVPRKSTFPENSRTLMDLLVSLIYKYGDERTKARAMLCDIYHHSLLDEFSTARDLLLMSHLQDSVQLMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNIAANDHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALNKGDFHKSYDIIKSLDVWKFVRNHDRVLEMLKEKIKEEALRTYLFTFSSSYDSLSLEQLTKMFDLSVPCIHSIVSRMILNEELHASLDEPSGCIIFQDVKHSRLHALAFQFTEKFSIIAESNERAMEARIGGGGLDLPLRRRDSQDYAAAAATTTVGGRWQDLSITQTRQGSGTGRAGYSIGGGRPLTLSQNGYTRDRTGRGAGGGYQSTRYQDSAYGGSGRTTQGSALRGAQVDTSTRMVSLKGVRA 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2371 831 MobiDBLite consensus disorder prediction 789 815 - -
Alju03g2371 831 Pfam PCI domain 552 680 IPR000717 -
Alju03g2371 831 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 826 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Alju03g2371 831 MobiDBLite consensus disorder prediction 30 121 - -
Alju03g2371 831 Gene3D - 592 708 - -
Alju03g2371 831 MobiDBLite consensus disorder prediction 53 72 - -
Alju03g2371 831 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 3 544 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Alju03g2371 831 MobiDBLite consensus disorder prediction 73 91 - -
Alju03g2371 831 MobiDBLite consensus disorder prediction 32 52 - -
Alju03g2371 831 SUPERFAMILY "Winged helix" DNA-binding domain 608 684 IPR036390 -
Alju03g2371 831 MobiDBLite consensus disorder prediction 92 121 - -
Alju03g2371 831 Coils Coil 42 69 - -
Alju03g2371 831 ProSiteProfiles PCI domain profile. 512 684 IPR000717 -
Alju03g2371 831 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 613 699 IPR000717 -
Alju03g2371 831 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 1 761 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Alju03g2371 831 MobiDBLite consensus disorder prediction 752 815 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2371 1 830 Eukaryotic Initiation Factors Gene Family AT3G56150 67.503 0.0 1076