Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2351 ATGGACAAAGCTTCAGAGACTAGTAGTAGTAGAGAGACACGTGACTTCATGAACGTCGATTCTTTCTCTCAGCTTCCCTTCATCCGCCCTTCCCCTCTTACTAAAGAAAAGCCCATCAAGCTCTTTGGCATTGAATTCGCTTCCCCCCAAGCCACCGCCACCGTGCCGCCCGCAGACGATTCCGAATCCGCCCAAGACTCAGGCAGCGGGAAGGACAACAACAGCGAGACTAACCGGAGATTCGAATGCCATTACTGCTGCAGAAACTTCCCAACCTCCCAAGCCTTAGGTGGCCACCAAAACGCTCATAAACGAGAGCGCCAACACGCCAAACGAGCCCATCATCTTCACATGTCTGAAGCTCAAGTCTATAGCCTTGTCAACTACAGGTCCTTCACTTCTCCAACTTCAACGTTAACCACCCCAATGCCTCCTGCTACTTACCCAACTTCTTCTGCTAGGTTTTATGGAAGCCCATATTCTCTTCACCACCACAATCCCATCAATGGAAGCCCCTTGGCCTTGTGGCGAATCCCCACCCTCCAAACTAACCCTACTTTCAATAATCGTGACCGTTTGTTGAATCCATTGCCCTCGTTTGCCGGCGACGATGTCAACAACAACATGAGGGCCTCGTCGCTGCAGCTTGCGGCCGGGTCTGCTTCCCCGTTGCAAAACCGGTACGTCGTCCATGACTCCAAACCCGGTGTCCAGGACCATGTGAGTTTGGATCTTCATCTACAGATGGGGGTTTATGAGATAGGGTGGGTTTCTGATTCGATGCAATGTGATTGA 795 0.5145 MDKASETSSSRETRDFMNVDSFSQLPFIRPSPLTKEKPIKLFGIEFASPQATATVPPADDSESAQDSGSGKDNNSETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHHLHMSEAQVYSLVNYRSFTSPTSTLTTPMPPATYPTSSARFYGSPYSLHHHNPINGSPLALWRIPTLQTNPTFNNRDRLLNPLPSFAGDDVNNNMRASSLQLAAGSASPLQNRYVVHDSKPGVQDHVSLDLHLQMGVYEIGWVSDSMQCD 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2351 264 MobiDBLite consensus disorder prediction 1 21 - -
Alju03g2351 264 MobiDBLite consensus disorder prediction 54 72 - -
Alju03g2351 264 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Alju03g2351 264 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Alju03g2351 264 MobiDBLite consensus disorder prediction 50 76 - -
Alju03g2351 264 Pfam C2H2-type zinc finger 80 105 - -
Alju03g2351 264 PANTHER ZINC FINGER PROTEIN GIS 1 247 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Alju03g2351 264 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2351 Alju-ChrAlju03 50298707 50299890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2351 6 247 C2H2 Transcription Factor Family AT3G58070 38.491 1.25e-40 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1213 01 9477250 9478029 Alju03g2351 03 50298707 50299890 CCT
Alju03g2351 03 50298707 50299890 Alju03g2351 03 50298707 50299890 ECH