Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2348 ATGAGTTGCTGTGGAGGAGGGGAGGAAGAGATCCCTGGCCTGCCTCCAAACCAATCCGCTGCACCACCTGGAGGGGTTAATGCATATGGTGGCGGAGGAGGAGAGAGAGGAGATCCAAGGGGCAATGCTGCCAAGTCAGGCGGTCCACAGAAGGATTTATCAATTGACGCCCCAGCTATTTCACTGGAGGAGCTAAATAGTGTAACTAGCAACTTTGGTTCAGATGCTTTGATTGGAGAAGGTTCCTATGGACGGGTTTTCTACGCAAAGTTGAGAAATGGTCAGGACGCGGCCATCAAAAAGCTGGATAACGGTTCTTCCCCAGAACCAGACTCTGATTTTACGACACAGTTATCTCTAGTTTCAAGACTAAAGCATGAGCATTTTTTGGAGTTGATGGGATATTGTCTGGAGGGAACCAACAGAATTTTGGTTTATCAGCATGCAAGCAAGGGCTCTCTGCATGATATATTACATGGTAGGAACTTGGTTGATACAGGAAGGAAAGGTATACAAGGGGCCGAGCCTGGTCCAACACTAAGCTGGAACCAGAGAGTAAAAATTGCATTTGGTGCAGCAAAAGGCCTTGAGTTTCTTCATGAGAAGTGTCAACCGTCCATAGTTCATCGTGATGTGAGATCAAGCAATGTCTTACTGTTTGACGACTTCGAGACTAAGCTTGCCGATTTCAACTTGACAAACCAGAGTTCTGACACAGCAGCTCGGCTTCATTCAACTAGAGTCTTGGGAACTTTTGGGTATCATGCTCCAGACAATTTCACGTTAGCACACCTGTTCAGGTATGCCATGACTGGCCAGATTACCCAGAAAAGTGATGTCTACAGTTTTGGAGTGGTGCTCTTAGAACTCCTGACAGGAAGAAAGCCAGTAGACCACACAATGCCCAAAGGACAACAAAGTCTGGTAACGTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAACAGTGTGTGGATCCAAAGCTAAACAATGAATACCCACCCAAGGCCGTTGCTAAGTTGGCAGCAGTCGCAGCACTCTGTGTTCAGTATGAAGCTGACTTCCGGCCAAATATGACGATTGTGGTTAAAGCTCTTCAGCCACTTCTCAATACAAAGCCAGCTGGCCCTGAATCTGATTGTATAAGGCATGGTTCAGTCCCCTTGACCCCCACTTCAACTGGAAACGAGTTAGCTTTCTGTCCACCAATTTGGACCCGGGCAGGCGGGCGGGCATCCTATAACCGTGCGTCCTTGAGTTGCCATTACCAATCTTCTGGCTGGTTATCCCTCCCTACGGAAAAAAAAAAATGTATACACACTGCATCAAATCTCATCTTCGTCAATTAA 1350 0.4719 MSCCGGGEEEIPGLPPNQSAAPPGGVNAYGGGGGERGDPRGNAAKSGGPQKDLSIDAPAISLEELNSVTSNFGSDALIGEGSYGRVFYAKLRNGQDAAIKKLDNGSSPEPDSDFTTQLSLVSRLKHEHFLELMGYCLEGTNRILVYQHASKGSLHDILHGRNLVDTGRKGIQGAEPGPTLSWNQRVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFDDFETKLADFNLTNQSSDTAARLHSTRVLGTFGYHAPDNFTLAHLFRYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNTKPAGPESDCIRHGSVPLTPTSTGNELAFCPPIWTRAGGRASYNRASLSCHYQSSGWLSLPTEKKKCIHTASNLIFVN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2348 449 Gene3D Phosphorylase Kinase; domain 1 48 148 - -
Alju03g2348 449 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 40 374 - -
Alju03g2348 449 ProSitePatterns Tyrosine protein kinases specific active-site signature. 207 219 IPR008266 GO:0004672|GO:0006468
Alju03g2348 449 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Alju03g2348 449 Gene3D Transferase(Phosphotransferase) domain 1 150 379 - -
Alju03g2348 449 MobiDBLite consensus disorder prediction 1 54 - -
Alju03g2348 449 SMART tyrkin_6 72 366 IPR020635 GO:0004713|GO:0006468
Alju03g2348 449 Pfam Protein tyrosine and serine/threonine kinase 77 366 IPR001245 GO:0004672|GO:0006468
Alju03g2348 449 FunFam PTI1-like tyrosine-protein kinase 3 150 375 - -
Alju03g2348 449 SUPERFAMILY Protein kinase-like (PK-like) 54 366 IPR011009 -
Alju03g2348 449 FunFam Pti1 kinase-like protein 48 148 - -
Alju03g2348 449 ProSiteProfiles Protein kinase domain profile. 72 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2348 Alju-ChrAlju03 50252599 50262354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2348 60 396 Receptor kinase-like Gene Family AT3G58690 42.183 2.34e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Alju03g2348 PK_Tyr_Ser-Thr 3.4e-40 CL0016