Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2333 ATGTTCCATAAGTCTCAATTACAAGCAGTAATCTTCATTATTGTTGCCCTCGTTCATGCTAGCTGCCTTTCGTTCAATTTCCCAACCTTCCAGCCCTCGGATGAACCAAGTTTAATTTTGAGCAAGAACTCAAAACTATACCTGAAAGGCATCCAGGTAACCCCTGATATTCGTGGTAAGATCGCAGATTATTCTGGCCGAGTTTTCTACGGAAAGCCGTACAGACTATGGAGCAAGAGCAAAAACCGAACTGCTGAGTTTAGTACCACCTTCGTGCTCAATATCAGCAATCAAACTTCCCCAGGAGGTGAAGGCTTGGCTTTTATATTGACCGGAGATACCACTCTTCCAGAAAACAGTGCCGGAGAATGGCTTGGAATCGTAAATGCTACAACCAATGGCACTTCTCGACCTGGGATTTTGGCAGTGGAGTTTGACACAAGACAAAACTCTGAAGAAGATGGCCCCAACAACCATCTTGGTATCAACATCAATAGTATCAACTCCATGATGCGTGTTTCATTACAAGACTTGGGGATCACTCTTTCATCGGGTATAGATGTCATGATCAGAGTTCAGTATGCTGAAGATGAAATATCTGTGTTTGGTTCCATGAATAGAAGTGCGGACATGAAGACTCTGCTCATTTCCCCACCTCTCAATCTATCTTCATATCTGCCAGAAGAGATTTTCCTGGGTTTCTCTGCTTCAACAAGTAACTATACAGAGCTGAACTGTGTAACAGCTTGGGAATTCTACGGTACCCAAATTGCAGGGGATGATCCAAAGCTGTTGTGGGTTTGGATCACAGTTCCTGCAACACTGGTCATCTTAGGTGGGGTGATCTTTTTCTTGCTCTGGCAAAGGAAACATCGTATGGAGATGTCAGAGGAAGCATACCCAAGAATAGAGGATCAGATTCAACACAGTTCTATGGCCCCAAAGAAGTTTCGACTTGGAGAAATCAGAAAAGCAACAGCCAGATTCAGCCCTCAAAACAAGCTTGGGGAAGGTGGTTTTGGAACAGTCTACAAGGGGTTCTTGGGAGGCAAAGAGGTAGCTGTGAAAAGAGTCTCCAAGGATTCACGTCAAGGCAAGCAGGAGTTCGTAGCAGAAGTGACAATAATAGGAAGTCTTCATCACAGAAACCTGGTGAAATTGATGGGGTGGTGCTATGAGAGCCGAGAACTAGTCCTTGTCTACGAGTTCATGCCTAATGGGGGCCTAGACATGTACCTGTATGATGATGATGATGAGAAGTTTGGCTGCGAAGATGGATCAATACTAAGCTGGAAAACAAGACACAGTGCTATATATGGTGTGGCTCAAGCACTAGATTATCTGCATAACGGATGTGAGAAAAAGGTGCTTCACAGAGACATAAAAGCCAGCAATATATTGTTGGACTCAGACTTCACGACCAAGTTGGGAGACTTTGGGCTGGCTCGTACCATTCAGAAGAGAGATGAAACTCACCACTCAACAAAAGCAATTGCAGGAACACCTGGCTACATGGCTCCAGAAACATTCCTTACAGGGAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGTGTTGTTATGTTACAAGTTGTGTGTGGAATGAGGAGAGGGAATCAGTATTCCCAGGTGGACGAGTATAATAATAACATTGTGCATTGGGTGTGGGAGCTTTACGGGAAGGGAAAGTTACTAGCTGCAGTGGATAGGAGAATAGTGAAGGAAATAGAAGAGGAAAACGTGCAAGATGTGCTTGTTTTGGGTTTAGCTTGTTGTCATCCAAACCCACATCACAGGCCTTCCATGAGGACTGTTATGCAGGTTCTTACTGAAGAAGTAGCTCCACCAGAGGTACCTAAGGAAAGACCTGCTTTTGTGTGGCCTGCCCTACCTCCTTCCTTCCCTCATGATGCTGATAGCTCTCTCACAGGAAGTCAGCTCGCTCCCTTCTTAGGAGATGTGGAGGTCACTGGCAGATGA 1980 0.4505 MFHKSQLQAVIFIIVALVHASCLSFNFPTFQPSDEPSLILSKNSKLYLKGIQVTPDIRGKIADYSGRVFYGKPYRLWSKSKNRTAEFSTTFVLNISNQTSPGGEGLAFILTGDTTLPENSAGEWLGIVNATTNGTSRPGILAVEFDTRQNSEEDGPNNHLGININSINSMMRVSLQDLGITLSSGIDVMIRVQYAEDEISVFGSMNRSADMKTLLISPPLNLSSYLPEEIFLGFSASTSNYTELNCVTAWEFYGTQIAGDDPKLLWVWITVPATLVILGGVIFFLLWQRKHRMEMSEEAYPRIEDQIQHSSMAPKKFRLGEIRKATARFSPQNKLGEGGFGTVYKGFLGGKEVAVKRVSKDSRQGKQEFVAEVTIIGSLHHRNLVKLMGWCYESRELVLVYEFMPNGGLDMYLYDDDDEKFGCEDGSILSWKTRHSAIYGVAQALDYLHNGCEKKVLHRDIKASNILLDSDFTTKLGDFGLARTIQKRDETHHSTKAIAGTPGYMAPETFLTGRATVETDVYAFGVVMLQVVCGMRRGNQYSQVDEYNNNIVHWVWELYGKGKLLAAVDRRIVKEIEEENVQDVLVLGLACCHPNPHHRPSMRTVMQVLTEEVAPPEVPKERPAFVWPALPPSFPHDADSSLTGSQLAPFLGDVEVTGR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2333 659 Pfam Legume lectin domain 23 258 IPR001220 GO:0030246
Alju03g2333 659 CDD STKc_IRAK 335 611 - -
Alju03g2333 659 Gene3D Transferase(Phosphotransferase) domain 1 404 617 - -
Alju03g2333 659 Pfam Protein kinase domain 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2333 659 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Alju03g2333 659 SMART serkin_6 329 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2333 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Alju03g2333 659 CDD lectin_legume_LecRK_Arcelin_ConA 23 252 IPR001220 GO:0030246
Alju03g2333 659 Gene3D - 21 260 - -
Alju03g2333 659 Gene3D Phosphorylase Kinase; domain 1 314 403 - -
Alju03g2333 659 FunFam Probable L-type lectin-domain containing receptor kinase S.5 22 261 - -
Alju03g2333 659 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 302 403 - -
Alju03g2333 659 ProSitePatterns Protein kinases ATP-binding region signature. 335 356 IPR017441 GO:0005524
Alju03g2333 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 260 IPR013320 -
Alju03g2333 659 FunFam probable L-type lectin-domain containing receptor kinase S.5 404 615 - -
Alju03g2333 659 PANTHER - 52 616 - -
Alju03g2333 659 SUPERFAMILY Protein kinase-like (PK-like) 311 609 IPR011009 -
Alju03g2333 659 ProSiteProfiles Protein kinase domain profile. 329 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2333 Alju-ChrAlju03 50143480 50145459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2333 63 623 Receptor kinase-like Gene Family AT5G10530 37.966 5.59e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju03g2333 Pkinase 1.2e-48 CL0016