Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2329 ATGGAAATTCCTGCCTCGGCCTCTGTTAAAGTTCAACATATAACCAAGAAATCTTCGGATGAACTCCTTAGAAAGTTTGCTGATGACTCCGACAAGAAGCCCCAGAAGAAAGAAGATTTACGTGCGACCAAACGTCGAAATAAAAATTGGGCTGTAACAGGTGACGGTCAATGTGAGAGTCCATCAAGTGGCAGCACCACTTTAGTCGAAAAGAGGTCACTTCTGCCGACACGGAGGCCGGCAATGCTCCGGCTACTTAGGATTGAGAGTGTACGACCAAGGAATGTCGGAACAAGTTTCTATTGTCATTCATTGAAAAGGAAGCTGCTTGGTGATTTATTTGGCACACCTAAATCCTTACCCATCTCAACTAACTTCAAAAAGAGAGGGAAATGTGGGATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGGCCGGTCAGGCGGTATGCCCGCATGAACAAGGATGACGTGGATGATACTTCCTCGATTGAAGACGCTCTGCTTTGGTATAAGGACCTCGAGAAACACTCGTGCGGCGAATTCTCTTATGCTGTGGTTCAGGCCAATGAAATTATCGAGGATCACAGCCAGGTCGAGACTGGCTCCGACGCTATGTTCATCGGCGTGTACGACGGCCACGGCGGTCCCGAGGCGTCTCGGTTCATCAGCGACCACCTCTTCCATCATCTAATGAGGATAGCTCGAGATAATGGTTGTACTATATCTGAAGATATCCTGAGAGGTGCTGTTTCTGCGACTGAAGATGGATTTCTGACTTTTGTTCGAAGGAGTTATGGTATAAAGCCATTGATGGCGGCTATCGGTTCCTGTTGTCTGGCTGGTGTTATTTGGAAAGGGACATTATATTTGGCCAACCTTGGAGACTCTCGTGCTGTAATTGGTTCTGTAGATAGATCTAATAAGATCGTTGCTGAGCAGTTGACTAGAGAGCACAATGCTAGCAAAGAGGAGGTTCGAACTGAACTTAGGTCCTTGCATCCTGAAGATTCCCAGATTGTAGTCATGAAGCATGGAACTTGGCGCATTAAGGGCATCATCCAGGTATCTAGATCTATAGGTGATGCATATTTGAAAAGACCAGAGTTTTCTCTTGATCCTTCATTCCCACGATTCCACCTACCAGAACCTATCCGGCGTCCTGTGCTGACGGCCGAGCCGTCTATATGTTCAAGGGTCCTACAACCAAATGATAAATTCCTAATATTTGCATCTGATGGACTTTGGGAACACTTGACAAATCAGGAAGCTGCAGAGATCGTGCATAACAACCCCCGAACGGGGATAGCAAGGAGACTGCTTAAAGCTGCTCTGAACGAGGCGGCTAGGAAACGAGAAATGAGGTACAAAGATCTGCAGAAGGTTGAGAAGGGGATCAGGAGGTTCTTTCACGATGATATCACCGTTGTGGTGGTCTTCATCGACCACGAGCTGGTGGGGAAGAATGTTGCTGTACCAGAATTGTCCATCAGAGGCTTCACTGACACGGTTGGTCCATCCAATTTTAAGGTCGTCCGCGATTGA 1551 0.4713 MEIPASASVKVQHITKKSSDELLRKFADDSDKKPQKKEDLRATKRRNKNWAVTGDGQCESPSSGSTTLVEKRSLLPTRRPAMLRLLRIESVRPRNVGTSFYCHSLKRKLLGDLFGTPKSLPISTNFKKRGKCGMFSWLARIVSACLRPVRRYARMNKDDVDDTSSIEDALLWYKDLEKHSCGEFSYAVVQANEIIEDHSQVETGSDAMFIGVYDGHGGPEASRFISDHLFHHLMRIARDNGCTISEDILRGAVSATEDGFLTFVRRSYGIKPLMAAIGSCCLAGVIWKGTLYLANLGDSRAVIGSVDRSNKIVAEQLTREHNASKEEVRTELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICSRVLQPNDKFLIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFIDHELVGKNVAVPELSIRGFTDTVGPSNFKVVRD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2329 516 Pfam Protein phosphatase 2C 200 452 IPR001932 -
Alju03g2329 516 ProSitePatterns PPM-type phosphatase domain signature. 209 217 IPR000222 GO:0043169
Alju03g2329 516 SMART PP2C_4 177 481 IPR001932 -
Alju03g2329 516 MobiDBLite consensus disorder prediction 25 71 - -
Alju03g2329 516 Gene3D - 156 492 IPR036457 -
Alju03g2329 516 MobiDBLite consensus disorder prediction 53 71 - -
Alju03g2329 516 MobiDBLite consensus disorder prediction 25 48 - -
Alju03g2329 516 ProSiteProfiles PPM-type phosphatase domain profile. 180 483 IPR001932 -
Alju03g2329 516 SUPERFAMILY PP2C-like 187 484 IPR036457 -
Alju03g2329 516 FunFam Probable protein phosphatase 2C 42 174 491 - -
Alju03g2329 516 PANTHER PROTEIN PHOSPHATASE 147 481 IPR015655 GO:0004722|GO:0006470
Alju03g2329 516 CDD PP2Cc 184 483 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2329 Alju-ChrAlju03 50120926 50126445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2329 134 513 PP2C-type Phosphatase Gene Family AT5G06750 69.821 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1190 01 9247971 9250566 Alju03g2329 03 50120926 50126445 CCT
Alju03g2329 03 50120926 50126445 Alju03g2329 03 50120926 50126445 ECH