Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2317 ATGCATCATTATCCGCAGAACCTGGACACTGAATTAGGGAAATCCAGCACAGGAACTCACACTCTATTCAACGTGGGAGGACCAGAACACCAAAGTCTAGAAACCACCTTCAACAACATTATGTCACCTGCTTTGTGTGCAACTAGCCGAGCCTGGATGGGCTTTCATCAACCTGACCCTCCGATTGGTTTTTGTTCTGATGAGCTCCTAGATCATTCGCCACTTCCATGCCATAAATCTTCTGGGGATCACTCCACCGTTTCCTCTATACAATATCATTCAGCCTCCCAATTCAGTTTCCCTAACTCCTTGCACTCCATCGTTGAATCTTTCTTGTCCAGCAGCGAAGAAGAAAGCCTTTCTGATTCTTTGTATGCTCAATCACAACAAAATGAACTGCCGGCCGCTGAGGATTTGAAGCCCCTCCAAATTTCCTTTCAGAGGAATCCCCAGATCTGTAATAATATATGTACTGTCTGTGATGATTCGCTGGCTGATCAGTCAGATAAGCAGTGTCCAAGAGCTTGTAGGAGCTCTCTAACTCGTAAAAGAAGAATAAGATGGACCAAGGATCTTCATGAGCCTTTCGTCATGATTGTCGATTGCCTCGGTGGTCCTCTTAAGGCAAAGCCTAAGTCTATACTTCAGATGATGCATTCAGATGTGCTGACCATTTCTCATATCAAAAGTCATTTGCAGAAATATCGATCTATAACATGGGACCGGAAAGATTTGCGGGCAGATACAACGAAATTTGCAACAGAGGCGCAGGAAAGGGTATGGTTCTTTAAGCATCCAGAAGTTGAACTTGCTGTTCCGGAGGTGCTTGTACCCGATCTTGACGGCACTGGTAGTGAGATGCACTTTCTTTTCTCTCTTGTACATGGCTTGTAG 894 0.4485 MHHYPQNLDTELGKSSTGTHTLFNVGGPEHQSLETTFNNIMSPALCATSRAWMGFHQPDPPIGFCSDELLDHSPLPCHKSSGDHSTVSSIQYHSASQFSFPNSLHSIVESFLSSSEEESLSDSLYAQSQQNELPAAEDLKPLQISFQRNPQICNNICTVCDDSLADQSDKQCPRACRSSLTRKRRIRWTKDLHEPFVMIVDCLGGPLKAKPKSILQMMHSDVLTISHIKSHLQKYRSITWDRKDLRADTTKFATEAQERVWFFKHPEVELAVPEVLVPDLDGTGSEMHFLFSLVHGL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2317 297 NCBIfam myb-like DNA-binding domain, SHAQKYF class 183 238 IPR006447 GO:0003677
Alju03g2317 297 Gene3D - 182 239 - -
Alju03g2317 297 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 174 240 IPR046955 GO:0003700
Alju03g2317 297 SUPERFAMILY Homeodomain-like 181 237 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2317 Alju-ChrAlju03 50035898 50039210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2317 183 236 G2-like Transcription Factor Family AT5G06800 68.519 4.74e-17 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g2317 None None None