Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2307 ATGTCTTCCAGTATCAACCAAACAACTACTCAACATGAACCTCTTCCTCCTCCTCCACATCGCCGTCACCACCACCACCAACAGCAAGCACAACATGATCATCATGTTTCTTTTGGAATAATGCAATCTTATTCTCCGTCGTCGACGTTTTCTGTCCCCGGAAACTACCTAAGCAAGGATTCAGGAGCTTATGATCTGGGAGATTTGGATCAAGCCCTTTTTCTCTATCTCGATGGACAACAAGACCCATCCAGTGTTCAACACCAGAGACCGGAGAACTCATCATCGTCAGAAATGAAGCCTCCCACTCTCAACATGTTCCCATCCCAACCCATGCATACACACCCGCCCTCAACCAAGCCTAGCATGGAAGTAGTTCCTCCTCAAGCCAGTGGTCCCAAAGGTCTATCAGAGCCCTCAATGGAATTGGCCAACCCACGAAACGAAGCCGTCTCAGCCCCTGAACCACCCAATTCCAAAATGCGAGAGAGCAATCGCAAGGGTCCAACGCCAAGTTCTGAACAAGAAGCCCCTAAAACCCCAGATCCTAAGACTCTCAGGAGACTTGCTCAGAATAGAGAAGCAGCTAGGAAAAGCAGGCTCAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCAAGTAGAATTAGGCTTAATCAACTGGAGCAAGAGCTGCATCGTGCTAGAGCTCAAGGAGTATTTTTAGCGGGAGGTGCAGCTTTGGGAGGAGAGCAAGGCCTTCCTATGGCTATGAGCAGCATTAGCTCAGATGCAGCAATGTTCGACGTAGAATATGCGAGATGGCTAGAAGAGCACCACCGGATAGTTTGCGAGCTAAGAGCAGCAGTTCAAGAGCACCTTCCAGAGAACGAGCTTCGTCTGTTTGTAGATAATTGCTTGGCACATTATGACCAATTAACGAGTCTCAAGAGCGTAGTGGCCAAAACAGACGCATTCCACATCGTGTCAGGCATGTGGAAGACCCCGGCTGAACGTTGCTTCATGTGGATCGGTGGTTTCCGGCCATCGGAACTCATTAAGATTATTGTGAGCCAAATTGAACCCCTGACGGAGCAGCAAATACTGGGTATATATGGGTTGCAACAGTCGACGCAAGAGGCAGAAGAGGCTCTTTCCCAAGGGCTTGAGGCTCTCAATCAATCTCTCTCAGACACAATAACATCTGACTCACTGAGCTCTCCGCCCAACATGGCTAACTACATGGGACAGATGGCCATGGCCATCAATAAGCTCTCCACTCTAGAAGGTTTCGTGAGACAGGCAGATAATCTGAGGCAACAGACGATTCAGCGGATGCTTGAGATACTGACTACACGGCAGGCGGCGAGGTGTATGCTGGCGATTGCCGAGTACTTCCACCGTCTGAGAGCTCTCAGTTCTCTGTGGATGGGACGACCTCGTCAAGATTAA 1428 0.4944 MSSSINQTTTQHEPLPPPPHRRHHHHQQQAQHDHHVSFGIMQSYSPSSTFSVPGNYLSKDSGAYDLGDLDQALFLYLDGQQDPSSVQHQRPENSSSSEMKPPTLNMFPSQPMHTHPPSTKPSMEVVPPQASGPKGLSEPSMELANPRNEAVSAPEPPNSKMRESNRKGPTPSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHRARAQGVFLAGGAALGGEQGLPMAMSSISSDAAMFDVEYARWLEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQLTSLKSVVAKTDAFHIVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGIYGLQQSTQEAEEALSQGLEALNQSLSDTITSDSLSSPPNMANYMGQMAMAINKLSTLEGFVRQADNLRQQTIQRMLEILTTRQAARCMLAIAEYFHRLRALSSLWMGRPRQD 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2307 475 CDD bZIP_HBP1b-like 184 236 - -
Alju03g2307 475 Pfam bZIP transcription factor 184 214 IPR004827 GO:0003700|GO:0006355
Alju03g2307 475 FunFam BZIP family transcription factor 183 232 - -
Alju03g2307 475 SUPERFAMILY Leucine zipper domain 184 226 IPR046347 GO:0003700|GO:0006355
Alju03g2307 475 Gene3D - 183 232 - -
Alju03g2307 475 Pfam Seed dormancy control 275 350 IPR025422 GO:0006351|GO:0043565
Alju03g2307 475 SMART brlzneu 180 253 IPR004827 GO:0003700|GO:0006355
Alju03g2307 475 MobiDBLite consensus disorder prediction 82 186 - -
Alju03g2307 475 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 226 IPR004827 GO:0003700|GO:0006355
Alju03g2307 475 Coils Coil 203 230 - -
Alju03g2307 475 MobiDBLite consensus disorder prediction 1 33 - -
Alju03g2307 475 ProSiteProfiles DOG1 domain profile. 257 471 IPR025422 GO:0006351|GO:0043565
Alju03g2307 475 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Alju03g2307 475 PANTHER TRANSCRIPTION FACTOR TGA9 104 474 - -
Alju03g2307 475 MobiDBLite consensus disorder prediction 163 179 - -
Alju03g2307 475 MobiDBLite consensus disorder prediction 82 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2307 Alju-ChrAlju03 49935038 49940621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2307 54 475 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.054 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju03g2307 DOG1 7.3e-31 No_clan