Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2297 ATGGATTTGAATTCGCATCAGAATTATCAGCCCCAGCAGCATCAATCCAATTCCGGATTAGCTCGGTTTCGTTCTGCGCCCAGCTCGCTTTTCGCTAATTTCAGACAACCTGTTGAATCTGTTAAATCCGAGATACGAACTTCGAGATTCGCAAACTGCAGTAATAGCAACGATACGGCGTTGCCAAGCTCTCAAGAATTCGAATCCGAACACAAACCCCCTAAATCTCCATCGGAGGCGGCTCTGAACCGTATGAATTCCCAGCAAGGCTACAGTGGCGGCGGGCTACCACCTCACTACCCCAGGCATAGTTCTTATAGTTCTTCCATGGATAGCTCCTTTGGACTGATGGGTTCAATGGGAGTGGATCACGAAACTCAGCAAAAAAGCTTTGCTTTGCCTCTTCTTAGGCAAAGTAGCTCACCTGCCGGTCTTTTCTCCAACATCTCATTTCCTAATGGGCATGCCGCCATTAGAGGGGTAAGAAACTATGGTGGGGTGAACAGTAGTAGTAATGATGGACTTGCTCCATCTATCAGCGGATTGAAGAATCAGACTAGCTTCTCATCAAGAAGTACCTCCCTGGGAGCGCTGTCCCAGATCTCTGAAATAGAGTGTGAGGGTATTGGAGCAACTAGCCCAGATGATGGTAGGGTGGGAACTAGTAACAGTGGTGACACTCGGTATTGTGGCCCTGGCTTCCCTTTTGCTTCCTGGAATGATACAAATCTTACTGGTTTTAGAAGGGACCAAACTAGTAATGAAAAGTTGTGTTCTGATGTTCAGAATATTGACCCCGGAAGTCGGGCTAATGTCTTATCGCACCATTTGAGTCTGCCAAAAACCCCATCACATATGGCTGCTGTGGACAAGTTTCTTCAATTCTCAGATTCTGTTCCCTGTAAAATAAGAGCAAAGCGGGGCTGTGCCACTCATCCTCGAAGTATAGCCGAAAGGGTTAGAAGAACTCGTATCAGTGAACGCATGAAAAAGTTACAAGATCTTGTCCCAAACATGGACAAGGTAAGATTAGTGATTTGCATCTTATTATCTGTATATGGAAAGTCTGTCATTGTATGA 1080 0.4574 MDLNSHQNYQPQQHQSNSGLARFRSAPSSLFANFRQPVESVKSEIRTSRFANCSNSNDTALPSSQEFESEHKPPKSPSEAALNRMNSQQGYSGGGLPPHYPRHSSYSSSMDSSFGLMGSMGVDHETQQKSFALPLLRQSSSPAGLFSNISFPNGHAAIRGVRNYGGVNSSSNDGLAPSISGLKNQTSFSSRSTSLGALSQISEIECEGIGATSPDDGRVGTSNSGDTRYCGPGFPFASWNDTNLTGFRRDQTSNEKLCSDVQNIDPGSRANVLSHHLSLPKTPSHMAAVDKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMDKVRLVICILLSVYGKSVIV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2297 359 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 312 341 IPR036638 GO:0046983
Alju03g2297 359 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 342 - -
Alju03g2297 359 MobiDBLite consensus disorder prediction 52 66 - -
Alju03g2297 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 309 359 IPR011598 GO:0046983
Alju03g2297 359 MobiDBLite consensus disorder prediction 52 111 - -
Alju03g2297 359 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2297 Alju-ChrAlju03 49830439 49832194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2297 1 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 42.896 1.70e-64 207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2297 03 49830439 49832194 Alju03g2297 03 49830439 49832194 ECH