Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2290 ATGGCTATATTCTGTACATACGTGTTCCTTATTCTCTCTGTGACCTTCTCAACATTCAATCCTGGTTGTTGTTCTTCTTCTTCTTCGTCAGAGGCGGATATCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCTAGGAAGGCTATGTCTAGCTGGTCCAACACTTCGTCCACTCACTATTGTAACTGGACTGGAATCGCCTGCTCTTCTCTCTCTGTCACTTCCATTAATCTTCAGCACTTGAACCTTTCTGGCGAACTCTCACCTTCCATATGTGATCTTCCAAATCTGTCATTCCTCAATCTTGCTGATAATATATTCAACCAGCCCATCCCTCTCCATCTTTCTCAGTGTAGTTCGTTGGAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCGTTAAAGGTGCTTGATTTCAGCAGAAATCACATAGAAGGGGATATCCCAGAGAGCTTGGGCTTCCTCAAGAACCTCCAAGTTCTTCACATGGGAAGTAACCTGCTATCAGGTGATGTACCTGCTATATTCATGAATTTAACTGAGCTTGCCGTTCTTGACTTGTCTGAAAATCCATACTTGGATAGTGAGATTCCTGAGAGTATAGGCGAACTTGGAAGTCTCAAGCAACTTCTGTTGCAAAGTTCTGGTTTTCACGGTGAAATTCCGGATTCTTTTGCGAACCTGCGTAGTTTGACCCATTTAGACCTCTCTCAGAACAATCTAACAGGTGAGATTTCTCAGGGTCTGGTGTCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAAGCTTTCGGGGTCATTTCCAAAGGGCATTTGTAATGCAAAAGGTCTCATAAATCTCAGCCTCCATACAAATATTTTCAGTGGTTCAATACCCAACACCATCGGTGAATGTAAGAATCTTGAGAGATTTCAGGTTCAGAACAACGAGTTAGCTGGAGACTTCCCTTATTCATTATGGTCATTGCCTAAAGTTAAGCTCATTCGAGCTGAAAACAACAGATTCTCAGGACAAATACCTGAATCCATATCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGATAATAACAGCTTTGCCGGTAAAATCCCTCAGAGTCTTGGGCAGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTACGGAGAACTCCCGGTAAACTTTTGTGATTCCCCTGTTATGAGCATTGTGAATCTCTCTCACAATTCCCTTTCCGGTCAAATCCCAGAGCTGAAAAAATGCAGGAAACTAGTTTCATTGTCTTTAGCAGACAATAGTCTCACCGGACAAATCCCTCCTTCCCTTGCTGAGTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCACTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCTGGTAAGGTACCTTACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGAACTTTGTGGCCCTGGATTGCCCACTTCTTGTTCTGATGATCATCCAAGACACCATTCCGTGGGTCTCACCGCCCTAGCATGTGCCCTTATCTCTGTAGCTTTTGTTGTAGGAACTGCTATGTTTGTTGGTGGGTTTATTTTGTATAGGAAGTCTAGCAAGAGGAATCAAATAGGAGTTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCAAGATCTGCTAATAGGAATGGATGAGAAAAGCTTGATTGGAAATGGTGAGGTTTTTGGCAAAGTTTATGTTGTGAGTTTACCCAGCGGTGAACAAGTGGCTGTAAAGAAGCTAGTCAATTTTGGGAACCAGACGTCAAAAAGTTTGAAAGCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAAAATGTTGCAAAAATACTGGGGTTTTGCCATTCTGATGAGTCAATCTTTCTCATTTATGAGTACCTGCAAGAAGGAAGCTTGGGGGACTTGATTTCCCGTGAGAATTTTGAGTTGCAGTGGGAGGCAAGATTGAGGATTGCCATCAGGGTCGCTCAAGCACTAGCTTATCTTCACAAAGACTATGTTCCTCACTTGCTTCACAGAAACGTCAAGTCCAGGAACATTCTGCTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAATTGTGGGAGAAGCCGCATTTCAGTCAACTGTTGCTTCTGAAGCGGCATCTTCCTGCTATAATGCTCCAGAATGTGGGTACAGTAAGAAAGCAACTGAAGAATTGGACATATACAGCTATGGTGTTGTATTGCTAGAGCTTGTGACCGGGAAGCAAGCAGAGAAAACAGTATCAACGGAGTCTCTTGACATAGTGAAGTGGGTACGAAGGAGAGTGAACATCACTGATGGGGTGTATCAAGTACTTGATCCCAAAATATCACATTCCAATCAGCAAGGAATGATTGGAGTTCTGGAAATCGCTCTTCATTGCACTTCCGTGGTGCCTGAAAAAAGACCATCGATGGTAGAAGTTGTACGAGCTCTTCAGTCCCTTGAGTCACAAACCATCGCTGCAAATTCTCAGGATTTGAATGAGGAACCCTCGATCCCAATATGA 2655 0.4309 MAIFCTYVFLILSVTFSTFNPGCCSSSSSSEADILLSFKASIEDSRKAMSSWSNTSSTHYCNWTGIACSSLSVTSINLQHLNLSGELSPSICDLPNLSFLNLADNIFNQPIPLHLSQCSSLETLNLSNNLIWGTIPMQISQFGSLKVLDFSRNHIEGDIPESLGFLKNLQVLHMGSNLLSGDVPAIFMNLTELAVLDLSENPYLDSEIPESIGELGSLKQLLLQSSGFHGEIPDSFANLRSLTHLDLSQNNLTGEISQGLVSSLKNLVSFDVSQNKLSGSFPKGICNAKGLINLSLHTNIFSGSIPNTIGECKNLERFQVQNNELAGDFPYSLWSLPKVKLIRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQSLGQVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGQIPPSLAELPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDHPRHHSVGLTALACALISVAFVVGTAMFVGGFILYRKSSKRNQIGVWRSVFFYPLRITEQDLLIGMDEKSLIGNGEVFGKVYVVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVAKILGFCHSDESIFLIYEYLQEGSLGDLISRENFELQWEARLRIAIRVAQALAYLHKDYVPHLLHRNVKSRNILLDANFEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPECGYSKKATEELDIYSYGVVLLELVTGKQAEKTVSTESLDIVKWVRRRVNITDGVYQVLDPKISHSNQQGMIGVLEIALHCTSVVPEKRPSMVEVVRALQSLESQTIAANSQDLNEEPSIPI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2290 884 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 869 - -
Alju03g2290 884 SMART LRR_typ_2 264 288 IPR003591 -
Alju03g2290 884 SMART LRR_typ_2 166 189 IPR003591 -
Alju03g2290 884 SMART LRR_typ_2 190 215 IPR003591 -
Alju03g2290 884 SMART LRR_typ_2 455 478 IPR003591 -
Alju03g2290 884 SMART LRR_typ_2 239 263 IPR003591 -
Alju03g2290 884 SUPERFAMILY L domain-like 303 402 - -
Alju03g2290 884 SUPERFAMILY RNI-like 75 504 - -
Alju03g2290 884 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 583 668 - -
Alju03g2290 884 Gene3D Phosphorylase Kinase; domain 1 586 668 - -
Alju03g2290 884 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 275 863 - -
Alju03g2290 884 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Alju03g2290 884 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Alju03g2290 884 SUPERFAMILY Protein kinase-like (PK-like) 596 865 IPR011009 -
Alju03g2290 884 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Alju03g2290 884 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 263 526 - -
Alju03g2290 884 Gene3D Ribonuclease Inhibitor 260 526 IPR032675 -
Alju03g2290 884 Pfam Protein tyrosine and serine/threonine kinase 596 861 IPR001245 GO:0004672|GO:0006468
Alju03g2290 884 Gene3D Ribonuclease Inhibitor 27 204 IPR032675 -
Alju03g2290 884 Gene3D Ribonuclease Inhibitor 205 259 IPR032675 -
Alju03g2290 884 Gene3D Transferase(Phosphotransferase) domain 1 669 881 - -
Alju03g2290 884 PRINTS Leucine-rich repeat signature 242 255 - -
Alju03g2290 884 PRINTS Leucine-rich repeat signature 455 468 - -
Alju03g2290 884 FunFam Leucine-rich repeat family protein 30 184 - -
Alju03g2290 884 ProSiteProfiles Protein kinase domain profile. 592 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2290 Alju-ChrAlju03 49785443 49788228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2290 35 864 Receptor kinase-like Gene Family AT5G06940 64.916 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju03g2290 PK_Tyr_Ser-Thr 2.5e-39 CL0016