Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2288 ATGAATATGTGCTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGATCAGGCCAAACTTGCAGCATCATCGGTCGAAAACATTGTGAATGGAAGCTCTAGCAGCAGCAGTGGGAAAGAGGCTACAACTGCTTGTTCTACTGATGTACAAATTGGAACTGTGGAGATCAAGACAATACATGCTGAAATTTGTCAGGATTCATCTTCTAGTGAGAGTTTAGAGATGAAAGTCAAGACTGGTCCCAGTAGATGCATGACTTGCCGGAAGCGTGTTGGATTAACTGGTTTTAGCTGCAAATGTGGGAACATTTTCTGTGCAATGCATCGTTATTCTGACAAACACAATTGCCCTTTTGATTATCGGACAGTTGGTCAGGATGCTATAGCTAAAGCCAACCCTGTAGTTAAGGCAGAAAAGCTTGACAAAATCTAG 432 0.4236 MNMCSKCYKDMLLKQDQAKLAASSVENIVNGSSSSSSGKEATTACSTDVQIGTVEIKTIHAEICQDSSSSESLEMKVKTGPSRCMTCRKRVGLTGFSCKCGNIFCAMHRYSDKHNCPFDYRTVGQDAIAKANPVVKAEKLDKI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2288 143 Gene3D - 1 44 - -
Alju03g2288 143 SMART AN1_Zf_4 84 121 IPR000058 GO:0008270
Alju03g2288 143 FunFam Zinc finger AN1-type containing 6 58 139 - -
Alju03g2288 143 Gene3D - 58 139 IPR035896 -
Alju03g2288 143 SUPERFAMILY AN1-like Zinc finger 72 138 IPR035896 -
Alju03g2288 143 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 143 - -
Alju03g2288 143 ProSiteProfiles Zinc finger AN1-type profile. 78 124 IPR000058 GO:0008270
Alju03g2288 143 Pfam AN1-like Zinc finger 84 120 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2288 Alju-ChrAlju03 49776614 49777045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2288 1 143 C2H2 Transcription Factor Family AT3G52800 40.690 2.77e-28 100