Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2254 ATGGCTTCTTCTTCCTCTGATCCTCCTCCAAAGTCCGAGCTTGGCTCAGCCATGGCAGCTACTTCGGAAGCAGCCACCACCGCCGATCAGGTGTTTCTATACAGGGATTTCAAGAAGCCGAAGAAAGAGAGGGGATGTACGGCCAAAGAGCGAATCAGCAAAATGCCTCCTTGTACTGCCGGTAAACGCAGCTCCATATATCGTGGTGTAACCAGGCATAGATGGACAGGTCGTTATGAAGCACATCTTTGGGATAAGAGCACGTGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGTTTACTTAGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCTTATGACCTTGCTGCCCTGAAATATTGGGGTCCTGGGACTCTCATTAATTTTCCAGTGTCTGATTATTCAAGAGATCTTGAAGAAATGCAGAATTTTTCAAGAGAAGAATACCTAGCATCTCTACGAAGGAAGAGCAGTGGATTTTCAAGAGGAATCTCAAAATATCGTGGACTCTCCAGTCGATGGGAACCATCATATGGTCGCATGGCTGGATCTGACTACTTCAATAGCATACATTATGGTACTGGTGATGATTCAGCTGCAGAAAGTGAATATTTAAGTGGTTTCAGTGTAGACAGAAAGATTGATTTAACAAGTTACATCAAATGGTGGGGATCTAGTAAGAGTCGCCAAGCTGATGCCGGAACAAAATCATCGGAAGAAAAAAAGCACAGCGTTGCTGGAGATCATTGCAGTGAACTCAGAACATTGGAACAGCAAGCACAACCAACTGAACCATATCAGATGCCACGGTTAGGCATGTCCCATGACGAAAAGAAGCACAAGAATACTTCAGTTTCTGCCTTAAGTATCTTGTCTCGATCAGCTGCTTACAAGAGCTTGCTAGAGAAAGCATCAAAGAGAGAGGAAAATAGCACTGAACCTGATGAAAATGAAAACAAAAATAGCATTGACAAGTTGGACCGTGGCAAGGCGGTTGCGAAATCATCAAATCATGATGGCAGCAACGAAAAAGCTGAATCTGTAATGGGGATGAGTGGGGCTTTGTCTCTTCAAAAGAATGTTTACAACCCACTGGTTCCATTCTTATCTACACCTCTTTTGACTGCTTATAATACTATCGATCCCTTAGTAGATCCTCTTCTCTGGACGTCTCTTGTTCCTATGCTTCCTGCTGGCTTTCCCCGTAATGCTGAGGTTACAAAGACTGAGGCCAGTTCATCTTATACCGTCTTTCAGCCGGAGGAGTGA 1275 0.4416 MASSSSDPPPKSELGSAMAATSEAATTADQVFLYRDFKKPKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYSRDLEEMQNFSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDDSAAESEYLSGFSVDRKIDLTSYIKWWGSSKSRQADAGTKSSEEKKHSVAGDHCSELRTLEQQAQPTEPYQMPRLGMSHDEKKHKNTSVSALSILSRSAAYKSLLEKASKREENSTEPDENENKNSIDKLDRGKAVAKSSNHDGSNEKAESVMGMSGALSLQKNVYNPLVPFLSTPLLTAYNTIDPLVDPLLWTSLVPMLPAGFPRNAEVTKTEASSSYTVFQPEE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2254 424 Gene3D AP2/ERF domain 66 134 IPR036955 GO:0003700|GO:0006355
Alju03g2254 424 FunFam AP2-like ethylene-responsive transcription factor 65 134 - -
Alju03g2254 424 MobiDBLite consensus disorder prediction 304 343 - -
Alju03g2254 424 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Alju03g2254 424 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Alju03g2254 424 MobiDBLite consensus disorder prediction 235 252 - -
Alju03g2254 424 MobiDBLite consensus disorder prediction 232 287 - -
Alju03g2254 424 ProSiteProfiles AP2/ERF domain profile. 66 132 IPR001471 GO:0003700|GO:0006355
Alju03g2254 424 SMART rav1_2 66 138 IPR001471 GO:0003700|GO:0006355
Alju03g2254 424 Pfam AP2 domain 66 124 IPR001471 GO:0003700|GO:0006355
Alju03g2254 424 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 30 309 - -
Alju03g2254 424 MobiDBLite consensus disorder prediction 304 349 - -
Alju03g2254 424 SUPERFAMILY DNA-binding domain 65 134 IPR016177 GO:0003677
Alju03g2254 424 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2254 Alju-ChrAlju03 49517202 49520625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2254 1 408 AP2-EREBP Transcription Factor Family AT2G41710 61.098 1.17e-158 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju03g2254 AP2 1.1e-13 CL0081