Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2249 ATGACTTACTCGACGCTCTGTAGGAGGCCAGAAGATTTGAAATTTTTCATGGAGGACTGCTCAAGAACTGGCCTTCACGATTTCAATGTGGCTTCACGAAAAGCTGAAGAAGCGGCTTGGAGACGTTATGAAGCCGCAGAGTGGCTTGAAAGGGAAGTGGGCCCGCTCGGCATATCCAAGCAGCCGTCGGAGAGAGAATTCATTTCTTGCTTAAGAAATGGTCTCGTTCTCTGCAACACAATTAATAAGATTCATGCAGGAGCCGTCCCCAAGGTTGTGGATTGTCAAATGCCCTTGCAATCAGTTGCTAGAGATTTCCAGCCTTTGCCTGCCTACCAGTACTTTGAAAATGTAAGAAACTTTCTGGTTGCAGCAGAAGAATTAAAGCTTCCAGCTTTTGAAGCTTCCGATCTTGAACGGGATGCTGTAGACATGGGATCAGTATCTAAGGTTGTCGATTGCGTTTTAGCGCTTAAATCACATCAAGAGTGGAAACGGACAACCACTGAAAATGGAAGTAACAGGCACTTGAGATCTCCTTTTTTAATGCACTCTGCCAGTAGAATGTATTCAAGACCCTCAGCCGCAATCTCTTCAGATGCCTGTAGGCGCTTGGATTTGTCAGCCACATCAGATAAAGAGAGCTCTCTCGAGGGTGATTTTCAGAAACCAGAAGGAAAAATTGTGGAATCAATTGTTAAGCTATTGGTTGACTGTATGGTTGACGCCAAAGAAAATATTGACGGCAACCTTGCTGCTTCTCTTCGTAATGCTCAGCAGGATCCAATTAAGCTATTCAGTGGGATAATGTCAACTTGTTTTGGGGATCAGCTCCAAACAAAGTTCCCTGAGTTAGCATTGCTACTGAGGGGTTATACAAAAGAAAGGAGCACTTCGTGTAATTCAACATCCGCAGCATCAGATGAATCTACACCTCAAATTTTTAAGGATATCAAAACTCTACTGTTGAAAACTAAGAATGAGTTTGAAGAGATGAAGTCCCAGTTTCAAAGAGATCTGAATTACCTTGGAAGCCAGGTACTGGAAATGTCCACTGCAGCATGTGGATATTACAAGGCTGTGAAGGAGAACAGCAAATTATACAATATGGTCCAAGATCTGAAAGGAAATATTCGAGTTTACTGCAGAATTAGGCCATCCTTGAGCGCTGAGTCCAAGAATGTGATAGATTTCATAGGAAAGGATGGTTCTCTTGTCCTATTAGATCAATCAAAATCACAAAAAGATGGAAAGAAGGTTTTTCAGTTTAATCGGGTTTTTGGATCATCAGCTAGCCAAGGTGAAATATACAAGGACGCTCGACCACTAATTAGATCTGTGATAGATGGATATAACGTTTGTATATTTGCTTATGGACGAACTGGATCTGGGAAGACATATACCATGAGTGGGCCATCAGGTGGATCTTCTAAAGATATGGGGATTAATTATCTTGCATTGAATGATCTTTTCCAGATGTCTAACCAACGAAAGGACATTATAACTTACGACATTTACGTTCAAATGGTTGAGATTTACAATGAGCAATTCGTTTCCTTAACTTACCACAAATTAGAGATACGAAGTTGTAATGACAATGGCTTGAACCTTCCTGATGCTATATTGCGTTCTGTAAAATCTACGCATGATGTATTGAGCCTCATGAAACTCGGTGAGGTTAACCGAGCTGTTAGTTCCACTTCCATCAACAACCGTAGTAGCCGTTCCCACAGTGTCCTTACTGTGCATGTTCATGGCAAAGATATCTCTGGGAGCTCCATTCGTGGTTGCTTGCATTTAATAGACCTTGCTGGAAGTGAGCGAGTGGAGAAATCTGAAGTTACAGGAGAAAGACTAAAAGAAGCACAATTCATCAACAAGTCTCTTTCCTGTTTGGGGGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATCCCTTACAGGAATAGTAAACTCACTCTTCTGTTGCAGGATTCCTTAGGTGGGCAAGCCAAAACATTGATGCTTGCTCATGTGAGTCCTGAAGAAGAGTCCTTTGGTGAAACAATCAGTACTCTAAAGTTTGCTCAGCGAGTTTCCACTGTGGAACTTGGAGCAGCTCGATCGAACAGAGAAAGCAGTGAGGTTATGCAACTTAAGGAACAGGCTGAGAACCTTAAGATGGCATTGTCGAAAATTCAATCTGATAGAACTCCATTGCGCCTTAGAAGACTTAGCATTGAGAATTGTAGCGCCACAAGGAATGACAACAATTCTATGAAGGCCGAGGATAAAAGTGGGATGAAATCACCTTCTTTTATGCCTCGTTCAAGAAGATTGAGTTTGGAAGGTTCAAAAAGCATCATCAAGAAAGAAACTGTACAGCCAAAAGATGTTACTGATGTAAGCAAAACCTTACAGTTGGATTCAGTTTCTCAACAGAAAAATCGTCTTCCGCGAGATACAGAGGCAGTGCCAAAACTATCCGGCCATGTCAGCAATAGTAGTTCCAAGATAGAACTGCAAAATAAAGCTCCTCGAAGTCCTACCAGCATTAAATATCAGAAGAAGTTGATGAAAATAGATTGTGCAGCTCAAGTTCATCCTCTTAAACTACCTGAGACACCTGAACCACAGGGGTTTGAAAAGATTGAAACATATAAAGCTGCAAGGAGTGATGTTGCAGTTTGCATGGATTTCCAGACACCAAATGTAGTTAGCAGCACGAATGGCAAAGGTTCCCAAATAAGGAGATCCTTACGAACCATAGGAAAACTCATTAATGGACCAGATAAGAGAAGCCAACAAAATATGGTGGGAGTGAAGTCGCCCATGAAGAACAACAGTAACATAAATGAAGCAAAATCTCCACCAAGTTCTGTTGCGAGAACAAAAAGGAGGCAATCTCTAACTGGGATTCAAGCTCCTGGCACTGAAAACTCTCGTAGATCTTCCCTTGGAGGAAAATCTGTGGTCTCCGGCGATAAGGAACAGAGGAACACGAAAACGCCTCCTCCAATACGATCATCAGCCGCCAAGAGTGGAAAACGGTGGCTACAGTAG 3045 0.4223 MTYSTLCRRPEDLKFFMEDCSRTGLHDFNVASRKAEEAAWRRYEAAEWLEREVGPLGISKQPSEREFISCLRNGLVLCNTINKIHAGAVPKVVDCQMPLQSVARDFQPLPAYQYFENVRNFLVAAEELKLPAFEASDLERDAVDMGSVSKVVDCVLALKSHQEWKRTTTENGSNRHLRSPFLMHSASRMYSRPSAAISSDACRRLDLSATSDKESSLEGDFQKPEGKIVESIVKLLVDCMVDAKENIDGNLAASLRNAQQDPIKLFSGIMSTCFGDQLQTKFPELALLLRGYTKERSTSCNSTSAASDESTPQIFKDIKTLLLKTKNEFEEMKSQFQRDLNYLGSQVLEMSTAACGYYKAVKENSKLYNMVQDLKGNIRVYCRIRPSLSAESKNVIDFIGKDGSLVLLDQSKSQKDGKKVFQFNRVFGSSASQGEIYKDARPLIRSVIDGYNVCIFAYGRTGSGKTYTMSGPSGGSSKDMGINYLALNDLFQMSNQRKDIITYDIYVQMVEIYNEQFVSLTYHKLEIRSCNDNGLNLPDAILRSVKSTHDVLSLMKLGEVNRAVSSTSINNRSSRSHSVLTVHVHGKDISGSSIRGCLHLIDLAGSERVEKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGQAKTLMLAHVSPEEESFGETISTLKFAQRVSTVELGAARSNRESSEVMQLKEQAENLKMALSKIQSDRTPLRLRRLSIENCSATRNDNNSMKAEDKSGMKSPSFMPRSRRLSLEGSKSIIKKETVQPKDVTDVSKTLQLDSVSQQKNRLPRDTEAVPKLSGHVSNSSSKIELQNKAPRSPTSIKYQKKLMKIDCAAQVHPLKLPETPEPQGFEKIETYKAARSDVAVCMDFQTPNVVSSTNGKGSQIRRSLRTIGKLINGPDKRSQQNMVGVKSPMKNNSNINEAKSPPSSVARTKRRQSLTGIQAPGTENSRRSSLGGKSVVSGDKEQRNTKTPPPIRSSAAKSGKRWLQ 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2249 1014 MobiDBLite consensus disorder prediction 923 982 - -
Alju03g2249 1014 FunFam Kinesin-like protein KIN-14L 27 190 - -
Alju03g2249 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 728 IPR027417 -
Alju03g2249 1014 SUPERFAMILY Calponin-homology domain, CH-domain 32 166 IPR036872 -
Alju03g2249 1014 Coils Coil 703 730 - -
Alju03g2249 1014 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Alju03g2249 1014 ProSiteProfiles Kinesin motor domain profile. 377 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g2249 1014 MobiDBLite consensus disorder prediction 804 842 - -
Alju03g2249 1014 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 880 IPR027640 GO:0003777|GO:0007018
Alju03g2249 1014 SMART ch_5 41 158 IPR001715 GO:0005515
Alju03g2249 1014 MobiDBLite consensus disorder prediction 747 774 - -
Alju03g2249 1014 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 319 698 - -
Alju03g2249 1014 Gene3D Kinesin motor domain 319 698 IPR036961 -
Alju03g2249 1014 CDD CH_AtKIN14-like 41 160 - -
Alju03g2249 1014 MobiDBLite consensus disorder prediction 918 1014 - -
Alju03g2249 1014 PRINTS Kinesin heavy chain signature 646 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g2249 1014 PRINTS Kinesin heavy chain signature 450 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g2249 1014 PRINTS Kinesin heavy chain signature 567 584 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g2249 1014 PRINTS Kinesin heavy chain signature 597 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g2249 1014 SMART kinesin_4 375 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g2249 1014 MobiDBLite consensus disorder prediction 822 842 - -
Alju03g2249 1014 ProSiteProfiles Calponin homology (CH) domain profile. 39 163 IPR001715 GO:0005515
Alju03g2249 1014 Pfam Kinesin motor domain 383 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju03g2249 1014 Gene3D - 31 163 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2249 Alju-ChrAlju03 49462118 49468098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2249 323 696 Calmodulin-binding Proteins AT5G65930 39.231 1.38e-69 251