Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2242 ATGGATAGCTTATTGAAGGATTTCGAACTTGAGCCCAAGAATCCTTCCACCGAAGCCATGCGGAGGTGGAGATCTGCCGTTCGGTTGGTCAAGAACCCTCGCAGAAGGTTTCGTATGGTCGCCGATCTCGACAAACGTTCCGAAGCCGAGAGGATGAAGCTGAAAATCCAGGAAACGATTCGGGTTGCTCTTTATGTTCAAAAGGCGGCACTGCAGTTTATGGATGCTGGAGTTCGAGTTGAGTACAGTCTATCAGAGGAGGTAAGAGAAGCTGGTTTTGGTATTGATCCAGATGACATTGCCTCCATTGCTCGTAGCCATGATTATAAGAAATTGAGAATGATTGGAGGAACTGAAGGGGTTGCATCAAAATTATCTGTCTCCTCCATGGACAAAGGTGTCAGCAAAAACACTATAAACACCAGGCAACAGATTTATGGGTTCAACCGCTATAAAGAGAAACCAACTAGAACCTTCCTCATGTTTGTGTGGGAAGCATTGCATGACTTAACGCTAATCATTCTTATGGTCTGTGCTTTAGCCTCTATAGGTATAGGGATTGCCACTGAAGGGTGGCCAAAGGGTGTGTATGATGGTTTGGGAATCATACTTAGTATATTCTTGGTAGTCATTGTTACTGCTGTAAGTGACTACAAGCAATCACTGCAGTTCAGGGATTTGGACAGGGAGAAGAAAAAGATATTTGTTCAGGTCACCAGGGATGGGAAAAGGGAGAAAATATCAATTTATGATCTGGTTGTGGGAGATATTGTTCATTTGTCAACTGGGGATCAAGTTCCAGCTGATGGGATTTTCTTATGGGGATACAGCTTGCTCATCGATGAGTCAAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTAAATGAAGAAAAACCTTTCCTTCTTTCAGGAACAAAAGTGCAAGATGGTCAAGGGAAGATGTTAGTGACAACTGTTGGCATGAGGACTGAATGGGGAAAGCTGATGGAAACCATAAACGAGGGTGGAGAGGATGAGACCCCATTGCAAGTGAAATTGAATGGAGTTGCTACGCTTATTGGTAAGATTGGTCTGGCTTTTGCTGTTGTAACATTTCTGGTGTTGATAATGAGGTTTGTGGTGGACAAAGCACAGCGCGGTGAGATCACTAATTGGTCTTCAAGTGATGCAATGAAGTTGCTGGACTACTTTGCTATTGCTGTTACCATTATAGTTGTTGCAGTTCCTGAAGGATTACCATTGGCTGTAACACTCAGCCTTGCTTTTGCAATGAAAAAATTAATGAATGACAAGGCACTTGTGAGGCATCTTGCAGCCTGTGAGACAATGGGTTCATCCAGTTGCATTTGCACTGATAAGACAGGGACACTGACTACTAATCACATGGTGGTTGATAAAATATGGACGTGTGAAAAATCCGTGGATATGAAAGGTGAAGAGAGCAGAGACAAATTGAAAACGGAAGTATCTAAAGAAGTTTTAAGCATCCTTCTCCAAGCTATATTTCAAAATACTTCTGCTGAAGTAGTTAAAGATAAGGATGGAAAGAACACAATATTGGGAACACCAACCGAATCTGCTTTAATAGAATTTGGGTTGTTTTTGGGTGGTGAATTGGATGCTCAGCGCAGTGAGTATGAGATTGTTAAGATTGAGCCTTTCAACTCAGTCCGGAAGAAGATGTCTGTCCTTGTGCGTCTTCCTGATGGAGGGGTACGAGCTTTCTGCAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACAAAATTATTGATAGTGATGGAAATACTGTTGATCTTCCTGAAGATCTTGCAAAGAATGTCTCTGATGTGATATATGGTTTTGCCTCTGAAGCCTTAAGAACTCTTTGTTTGGCTTTCAAAGACATAAATGATGCCCAACAAGGGGAGACTAGTATACCTGATAATGGCTATACACTAATAGCTGTTGTAGGAATCAAGGATCCTGTGCGCCCTGGGGTTAAAGAAGCTGTTCAAACATGTTTGGCCGCTGGAATAACAGTTCGTATGGTCACTGGAGACAATATAAACACAGCTAAGGCTATAGCTAAAGAATGTGGTATACTTACTGAAGGTGGTGTTGCCATTGAAGGACCAGAATTTCGAAACCTGTCTCCTGATCAAATGAAGGAGATCATGCCAAAAATTCAGGTAATGGCACGATCCTTACCGCTTGACAAACATACCTTAGTTACAAATTTGCGGAACATGTTTGGTGAGGTTGTTGCTGTTACAGGCGATGGAACCAATGATGCTCCTGCACTGCATGAGTCTGACATTGGACTTGCCATGGGAATAGCTGGAACCGAGGTTGCTAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCTCAACTATTGTCAATGTGGCCAGATGGGGGCGAGCTGTATACATAAATATTCAGAAATTTGTGCAATTTCAGTTAACAGTCAATGTGGTGGCTCTGGTGATCAACTTCGTTTCTGCATGCTTCACAGGATCTGCTCCTTTAACAGCTGTACAATTGCTTTGGGTGAACTTGATTATGGACACTCTGGGTGCATTGGCCCTGGCCACAGAACCTCCTAATGATGAGCTCATGAAAAGGCTTCCTGTTGGTAGAGGAGCAAGCTTTATCACCAAACCCATGTGGAGAAACATCATTGGTCAAAGTATATATCAACTAATTGTCCTTGCAGTTCTCAATTTTGATGGGAAGAACCTTCTGAAACTCAATGGTCCAGATGCAACCAGTGTCCTAAACACGTTGATATTCAACTCCTTTGTCTTCTGCCAGGTTTTCAATGAGATCAACAGCCGAGCCATAGAGGACATAAACATATTCAGAGGCATGTTTGAGAGTTGGGTATTTTTAGCTGTAGTTTTTTCCTCAGTGGCATTTCAAGCGGTGATTGTTGAGCTCTTGGGAACATTTGCCAGCACTGTGCCTTTGAATTGGCAACTATGGGTGCTGAGTGTGTTAATTGGAGCAGTTAGCTTGCCCGTAGGGGCCATCCTCAAGTGCATCCCTGTTCAAAGAGCTGCTCCAAAACATCACCACGATGGCTATGACGCTTTGCCTTCTGGTCCTGACATGGCTTAA 3108 0.4276 MDSLLKDFELEPKNPSTEAMRRWRSAVRLVKNPRRRFRMVADLDKRSEAERMKLKIQETIRVALYVQKAALQFMDAGVRVEYSLSEEVREAGFGIDPDDIASIARSHDYKKLRMIGGTEGVASKLSVSSMDKGVSKNTINTRQQIYGFNRYKEKPTRTFLMFVWEALHDLTLIILMVCALASIGIGIATEGWPKGVYDGLGIILSIFLVVIVTAVSDYKQSLQFRDLDREKKKIFVQVTRDGKREKISIYDLVVGDIVHLSTGDQVPADGIFLWGYSLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETINEGGEDETPLQVKLNGVATLIGKIGLAFAVVTFLVLIMRFVVDKAQRGEITNWSSSDAMKLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLAACETMGSSSCICTDKTGTLTTNHMVVDKIWTCEKSVDMKGEESRDKLKTEVSKEVLSILLQAIFQNTSAEVVKDKDGKNTILGTPTESALIEFGLFLGGELDAQRSEYEIVKIEPFNSVRKKMSVLVRLPDGGVRAFCKGASEIILRMCDKIIDSDGNTVDLPEDLAKNVSDVIYGFASEALRTLCLAFKDINDAQQGETSIPDNGYTLIAVVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTAKAIAKECGILTEGGVAIEGPEFRNLSPDQMKEIMPKIQVMARSLPLDKHTLVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNVVALVINFVSACFTGSAPLTAVQLLWVNLIMDTLGALALATEPPNDELMKRLPVGRGASFITKPMWRNIIGQSIYQLIVLAVLNFDGKNLLKLNGPDATSVLNTLIFNSFVFCQVFNEINSRAIEDINIFRGMFESWVFLAVVFSSVAFQAVIVELLGTFASTVPLNWQLWVLSVLIGAVSLPVGAILKCIPVQRAAPKHHHDGYDALPSGPDMA 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2242 1035 FunFam Calcium-transporting ATPase 212 333 - -
Alju03g2242 1035 SFLD p-type atpase 432 804 IPR044492 -
Alju03g2242 1035 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 661 IPR023299 GO:0000166
Alju03g2242 1035 FunFam Calcium-transporting ATPase 769 1015 - -
Alju03g2242 1035 Gene3D - 165 1011 - -
Alju03g2242 1035 Gene3D - 447 797 IPR023214 -
Alju03g2242 1035 Pfam Cation transporter/ATPase, N-terminus 117 182 IPR004014 -
Alju03g2242 1035 Pfam E1-E2 ATPase 235 428 - -
Alju03g2242 1035 Pfam Cation transport ATPase (P-type) 504 590 - -
Alju03g2242 1035 SMART Cation_ATPase_N_a_2 108 187 IPR004014 -
Alju03g2242 1035 FunFam Calcium-transporting ATPase 15 75 - -
Alju03g2242 1035 Gene3D - 132 333 - -
Alju03g2242 1035 FunFam Calcium-transporting ATPase 460 656 - -
Alju03g2242 1035 Pfam Cation transporting ATPase, C-terminus 837 1010 IPR006068 -
Alju03g2242 1035 SFLD Haloacid Dehalogenase 432 804 - -
Alju03g2242 1035 NCBIfam HAD-IC family P-type ATPase 392 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju03g2242 1035 NCBIfam HAD-IC family P-type ATPase 717 840 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju03g2242 1035 NCBIfam HAD-IC family P-type ATPase 202 372 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju03g2242 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Alju03g2242 1035 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju03g2242 1035 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju03g2242 1035 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju03g2242 1035 Gene3D - 15 76 - -
Alju03g2242 1035 PANTHER CATION TRANSPORTING ATPASE 81 1013 - -
Alju03g2242 1035 NCBIfam calcium-translocating P-type ATPase, PMCA-type 104 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Alju03g2242 1035 SUPERFAMILY HAD-like 449 857 IPR036412 -
Alju03g2242 1035 Gene3D - 460 656 IPR023299 GO:0000166
Alju03g2242 1035 CDD P-type_ATPase_Ca_PMCA-like 139 885 - -
Alju03g2242 1035 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Alju03g2242 1035 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Alju03g2242 1035 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Alju03g2242 1035 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Alju03g2242 1035 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Alju03g2242 1035 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Alju03g2242 1035 FunFam Calcium-transporting ATPase 649 797 - -
Alju03g2242 1035 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Alju03g2242 1035 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Alju03g2242 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1014 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2242 Alju-ChrAlju03 49393540 49399421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2242 56 1032 Primary Pumps ATPases AT3G57330 73.695 0.0 1501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1087 01 8308976 8315787 Alju03g2242 03 49393540 49399421 CCT
Alju03g2242 03 49393540 49399421 Alju03g2242 03 49393540 49399421 ECH