Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2228 ATGGGTGTGCAAGTTTCCACTTTCCATCGTCTACTCTGTCTCTGCATTTCCCTCTGTTTTGGAGTTATGGAGACTTGTAAAAGCCAATGGACGCATTTACCCTTGTTGTTTCTCTCTCTGTTTTTCACCGCAGGATCAGCTGATCATTACCCAACACAGCGAAACATCGGATTGAGGCCTGATTCGACGCCGGAGAGGTATCTCCAGATAGCAGCAAATGGTGCTCCCTTCAAGATTGCTCTTTTCGCCGACTTGCATTTTGGAGAGGCTGCGTCCACAGATTGGGGCCCACTTCAGGACGTGAACTCCACCAGAGTCATGAATCAAGTCTTCCATGATGAAACTCCAGACTTTGTGATATATCTTGGCGATGTTATTACGGCTAACAATATAATGACTAAAAATGCAAGCTTGTATTGGGATCAAGCAACTTCTTCAACAAGAAACAGGGGTATACCATGGGCAAGTGTGTTTGGGAACCATGATGATGCTCCATTTGAGTGGTCACTAGGCTGGTTCTCTTCACCAAAAATCCCTCCACTTATCTGCACTCAACCCACTTCTTCATATTCAGGAGAAGAATGTAGCTTCAAGGGAACAGGACGGTTGGAACTGATGAAAAATGAAATCAAGAACAATGCCTCCTTTTCTGTGATTGGTCCCCGAGATCTTTGGCCAAGTGTATCCAATTATGTTCTCCAAATCTCTTCATCAGATGATCTAAAATCACCTGTGGCTTTCCTTTATTTTCTTGATTCTGGCGGTGGTTCCTATCCTGAAATCGTTTCCAGCGCCCAAGCAGAATGGTTCAAGAAGAAAGCTGAAGACATTAATCCTGAGTCAAGGGTGCCAGAGATCATTTTCTGGCATATACCAAGTGAGGCTTATAAAGAGGTGGCTCCCAAGTCCACAATAGCCAACCCTTGTGTAGGTTCTTTAAACAATGAAGAGGTGGCAGCACAAAAAACTGAAACGGGTATCATGAAACTCCTTGGGGAAAGAAGTTCTGTCAAGGCGATATTTGTGGGACACAACCATGGTTTGGATTGGTGTTGCCCATACAAGAAACTATGGCTGTGCTATGCTAGACACACTGGTTATGGTGGCTATGGAAATTGGTCTAGAGGGGCTAGAATTGTGGAAATCTCTGAGAAGCCCTTCTCTCTTCGGTCGTGGATAAGGATGGAGGACGGCATCCTGCACAGCATAGTTCATTGGTGTTCACTGGCCTTAGAAAAGTGGAACTGCTGGTTTGGATGCAGCAAAAAGCTCTCAACTTGTGAGGCAAAGCCCAGAAATTCAAAGAGATGGAATTGTGGCCTTGGCGGGGTCAAGCAAAAACAGCAACCCAATCTTATAGAACCGAACAGAATACTAAGTGAAGCAAGAGAAGAACAGAGAAAGCATGCATTGACAGTGGCTATTGCAACAGCGGCAGCTGCTGAGGCTGCAGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCAGGCTCACAGGTGCTTCTCGCTCCTACTTATATCTCTCCAACGGAAATCGAAATTTGGCCGCTACTAAAATTCAAAGTGCATACCGTGGGCATCTGGCCAGGAAAGCATTCAGAGCACTGAAGGGAATTATCAGACTGCAAGCTATAGTTCGTGGTCGAGCTGTGAGACTTCAAATGGGTTTGCATTCCAACGGAAGAAAGCAGGTAGGAATCCAGAAAAGCAGCAGTCATGCTGCAGATAGAATCAACATAAATGATAAGAGCGAACAGCTTCAAAAGCAGAAAAAGAAGTTGGAGGATACAGAAATGAAGCTTGAATGTCACAGTCAAAGAACTTGGGATTGCAGCTTGCACACAAAAGAAGACATGGAAGCTATATGGTTGAGAAAGCAAGAGGCTATTATTAAAAGGGAACGCATGAAGCAGTACTCTTTCTCACACCGGGAGAGAAAATTTTGCCACATGGGGGTTGAATCAATTCCCTATAAGGAATTCAGAGGAGAGAGCTGCCGTACTCTAGGACAATGGCTGGACGGAGAAAAATGCAATGGAGATGTGTTGTATAAAGCAACAATTCCTTCAAACTTGATCGCTAGGGAATGGTGTGAAACAACACAAGATGAACTGACTTCAGAGCTTTCATTTCCAAGGAAGTCATTTTCTCGTGTGAAGAAAAGTTCAGTCGTAGATGACAGTTCCATGCAAAATTCTCCCGTCTTGCCAACATTCATGGGAGTGAGAGAAAAGGCAAGGTCTATGAGTACTCCGAGACAGAGAGCAGGATTTATGGATTCAGATTCTCAGAGAGAAGTCAGAAATTTTAGGTCTTGTTGCCTTGAAGCAACTAGCAGCGCCAATGAAGAAAATGAAGTTTGTCAGCAGAGTTGTCAGAGTATCAACCGCCATTACTACCGTTAG 2403 0.4461 MGVQVSTFHRLLCLCISLCFGVMETCKSQWTHLPLLFLSLFFTAGSADHYPTQRNIGLRPDSTPERYLQIAANGAPFKIALFADLHFGEAASTDWGPLQDVNSTRVMNQVFHDETPDFVIYLGDVITANNIMTKNASLYWDQATSSTRNRGIPWASVFGNHDDAPFEWSLGWFSSPKIPPLICTQPTSSYSGEECSFKGTGRLELMKNEIKNNASFSVIGPRDLWPSVSNYVLQISSSDDLKSPVAFLYFLDSGGGSYPEIVSSAQAEWFKKKAEDINPESRVPEIIFWHIPSEAYKEVAPKSTIANPCVGSLNNEEVAAQKTETGIMKLLGERSSVKAIFVGHNHGLDWCCPYKKLWLCYARHTGYGGYGNWSRGARIVEISEKPFSLRSWIRMEDGILHSIVHWCSLALEKWNCWFGCSKKLSTCEAKPRNSKRWNCGLGGVKQKQQPNLIEPNRILSEAREEQRKHALTVAIATAAAAEAAVAAAHAAAEVVRLTGASRSYLYLSNGNRNLAATKIQSAYRGHLARKAFRALKGIIRLQAIVRGRAVRLQMGLHSNGRKQVGIQKSSSHAADRININDKSEQLQKQKKKLEDTEMKLECHSQRTWDCSLHTKEDMEAIWLRKQEAIIKRERMKQYSFSHRERKFCHMGVESIPYKEFRGESCRTLGQWLDGEKCNGDVLYKATIPSNLIAREWCETTQDELTSELSFPRKSFSRVKKSSVVDDSSMQNSPVLPTFMGVREKARSMSTPRQRAGFMDSDSQREVRNFRSCCLEATSSANEENEVCQQSCQSINRHYYR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2228 800 Coils Coil 576 606 - -
Alju03g2228 800 Pfam IQ calmodulin-binding motif 515 533 IPR000048 GO:0005515
Alju03g2228 800 Gene3D - 76 395 IPR029052 -
Alju03g2228 800 SMART iq_5 511 533 IPR000048 GO:0005515
Alju03g2228 800 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 35 403 - -
Alju03g2228 800 Gene3D - 511 559 - -
Alju03g2228 800 ProSiteProfiles IQ motif profile. 512 540 IPR000048 GO:0005515
Alju03g2228 800 Pfam Calcineurin-like phosphoesterase 77 346 IPR004843 GO:0016787
Alju03g2228 800 SUPERFAMILY Metallo-dependent phosphatases 76 393 IPR029052 -
Alju03g2228 800 CDD MPP_Dcr2 77 371 - -
Alju03g2228 800 FunFam Predicted protein 186 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2228 Alju-ChrAlju03 49293450 49299780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2228 411 760 IQD Protein Family AT5G03960 44.415 1.41e-54 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2228 03 49293450 49299780 Alju03g2228 03 49293450 49299780 ECH