Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2193 ATGCGCACATCCATCTCTCCAGTTAAAAATCCTCTCCACCTATTTCCCACCCAACAAAATATATTCACTCCCATTTATTTCCCACCCCTCCCCCCCACTCCCACCCTCCTTTTATTCCTTTCTTGTTTTGTTTTTCAGTCCCCTCCTTTTATATTCCCCCTGCATTGCTTCCCCTCTAATTCACCATCTCCTTGCCATTTGGATGAAATCTGGTCGGATCTTGCTTTTCTTCCATGTCCATTCCTGTGGCTCTCCTTCCCTTACTTAACTCTTCTTCTCCCCCACTCTTCCCCTAGCCTCCTCCCCATCTTCATCTTCTCTCCTCCGACGCAAAATCACCCAACGCTCATTCTCCTCCCCTCAGTCACGATTCTCGTTCTTGTTTTGCGTCTGGAATCTGTTCCAATGGGAATGGCCGCGGACTCCCAATTTCATGTATTGGCCGTAGATGATAGCCTCATAGACAGGAAGCTCATTGAGAAGCTGCTCAAGACCTCTTCCTATCAAGTTACTACGGTGGATTCTGGTACCAAGGCTCTGGAGTTCTTGGGCTTGCGCGACAATGACCAGTTCGACCCCAGCACGCCATCGGTTTCTCCTGGCAATCATCAGGAAGTGGAGGTGAATCTTATTATTACGGACTACTGCATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCATCTTTAAGAAACATACCAGTGGTGATTATGTCGTCAGAGAATGTGCCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAGTTTTTTCTTAAGCCAGTGAGGCTATCAGATTTGAATAAGCTTCGACCCCATTTGATGAAGACAAAGTTGAAAGAACAAAAGCCTGAAACAACGCAAGAAATTCCTGAAAACCCCCGAGTTCAACAAGAAGAAAATCAAATTGATGTGCAACAACCTACATCACAGCCACAACTAGACCAACAACAACGACAACCACAGCCACAACTAGAACAACGACAACCACAATCACCACAAGCAGCCAGTAATAACAAGAGAAAGGCCATAGAACAACAGGGGCTTCCACCTGAGACTGAAAGAACGAGACCTAGATACAGTGACATAGCCACAGTGGTGTGA 1122 0.4608 MRTSISPVKNPLHLFPTQQNIFTPIYFPPLPPTPTLLLFLSCFVFQSPPFIFPLHCFPSNSPSPCHLDEIWSDLAFLPCPFLWLSFPYLTLLLPHSSPSLLPIFIFSPPTQNHPTLILLPSVTILVLVLRLESVPMGMAADSQFHVLAVDDSLIDRKLIEKLLKTSSYQVTTVDSGTKALEFLGLRDNDQFDPSTPSVSPGNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLRPHLMKTKLKEQKPETTQEIPENPRVQQEENQIDVQQPTSQPQLDQQQRQPQPQLEQRQPQSPQAASNNKRKAIEQQGLPPETERTRPRYSDIATVV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2193 373 ProSiteProfiles Response regulatory domain profile. 145 281 IPR001789 GO:0000160
Alju03g2193 373 Pfam Response regulator receiver domain 146 275 IPR001789 GO:0000160
Alju03g2193 373 SMART REC_2 144 277 IPR001789 GO:0000160
Alju03g2193 373 MobiDBLite consensus disorder prediction 295 350 - -
Alju03g2193 373 CDD REC_typeA_ARR 146 276 - -
Alju03g2193 373 PANTHER TWO-COMPONENT RESPONSE REGULATOR 144 330 IPR045279 GO:0009736
Alju03g2193 373 SUPERFAMILY CheY-like 143 289 IPR011006 -
Alju03g2193 373 Gene3D - 145 363 - -
Alju03g2193 373 MobiDBLite consensus disorder prediction 282 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2193 Alju-ChrAlju03 49049566 49052085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2193 136 373 Response Regulator Gene Family AT3G57040 61.200 3.08e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju03g2193 Response_reg 2.4e-19 CL0304