Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2179 ATGATATCTCAGTCGCTTGCCATGGCTGCAACGTTAATATTTGTGGTTCTTGCACAAATACTCACTTCAGTTACTTCACTGTCAGAAGCTGATAAGATTATTAGTTTGCCAGGGCAGCCACCGGTCAAGTTTAAGCAATACTCTGGTTACATTACCGTTGATGAGAACCGGCACAGAGCTCTATTTTACTATTTTGCTGAAGCAGAATCAGAACCTGCTTATAAGCCACTAGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCGTCTGTGGGAGCTGGAGCGTTCGTTGAACATGGACCTTTCAAACCAAGTGGAAACGTTCTCGTGAGAAATGAATATAGTTGGAACAGAGAGGCAAATATGCTATACGTGGAATCACCGGCCGGTGTTGGTTTCTCATACTCTGCTAATGAATCATTCTATGAATTTTTGAACGATGAAATCACAGCAAGGGACAATCTTGTTTTCCTACAACGTTGGTTCACTAGATTCCCGGAGTACAAAAGCAATGATTTCTTCATCACCGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCCCAGCTCATTGTTCAAACCAAAACAAAGTTCAATCTCAAGGGGATAGCTCTAGGGAATCCTCTTTTGGAATTTAATACTGATCTAAATTCTAGAGCTGAATTCTTCTGGTCACACGGACTAATATCAGATACAACCTATAACATCTTCAACACAATTTGTAATTTTTCCCAAATTTGGAGACAATATCACGGTGAGACTCCAAGTGTGAGTTGTGCAGAAGCGAATAAACTGGTGACAAGGGAGATTGGTAAATTTATTAATCCATACGATGTCACTCTCGATGTTTGTGTGTCATCCTTAGATCAGCAGGCTCAAACGCTAAATCAACTGCAAGAGACAGCCAAGATAGATGTTTGTTTGGATGATGAAACATCTGCATATTTGAACAGGAAAGACGTACAGGAAGGTCTCCATGCTGAGCTGGTGGGAATTATCAATTGGTCTGTTTGTAGCGAGGTTCTAAGATATGACTATCAGAATCTAGAAGTACCAACAATTCCTATTCTAGGAGAACTCGTGAAGTCCAGCATCCAGGTTCTTGTGTACAGTGGAGATCAAGATTCAGTGGTCCCGTTAACCGGAACACGTTCTCTGGTGAATAAATTGGCCAAGGAGTTAGGACTCAATACAACGGTGACTTACAGAGCCTGGTTCACGGGGAGACAGGTTGCTGGATGGACACAAGTTTACGGTAACAATAACATGTTATCATTTGCCACCATAAGAGGGGCGGCTCATGAAGCTCCATTTTCGCAGCCAGAGAGATCACTCGTGCTATTCAAATCATTGCTCCAGGGAAAGCCCCTTCCAGATGCAGCTCCTTCAATCTAA 1395 0.428 MISQSLAMAATLIFVVLAQILTSVTSLSEADKIISLPGQPPVKFKQYSGYITVDENRHRALFYYFAEAESEPAYKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSGNVLVRNEYSWNREANMLYVESPAGVGFSYSANESFYEFLNDEITARDNLVFLQRWFTRFPEYKSNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIALGNPLLEFNTDLNSRAEFFWSHGLISDTTYNIFNTICNFSQIWRQYHGETPSVSCAEANKLVTREIGKFINPYDVTLDVCVSSLDQQAQTLNQLQETAKIDVCLDDETSAYLNRKDVQEGLHAELVGIINWSVCSEVLRYDYQNLEVPTIPILGELVKSSIQVLVYSGDQDSVVPLTGTRSLVNKLAKELGLNTTVTYRAWFTGRQVAGWTQVYGNNNMLSFATIRGAAHEAPFSQPERSLVLFKSLLQGKPLPDAAPSI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2179 464 Pfam Serine carboxypeptidase 37 453 IPR001563 GO:0004185|GO:0006508
Alju03g2179 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Alju03g2179 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Alju03g2179 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Alju03g2179 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Alju03g2179 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 441 IPR001563 GO:0004185|GO:0006508
Alju03g2179 464 FunFam Carboxypeptidase 353 454 - -
Alju03g2179 464 Gene3D - 307 342 - -
Alju03g2179 464 FunFam Carboxypeptidase 26 458 - -
Alju03g2179 464 Gene3D - 353 454 - -
Alju03g2179 464 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Alju03g2179 464 SUPERFAMILY alpha/beta-Hydrolases 34 458 IPR029058 -
Alju03g2179 464 Gene3D alpha/beta hydrolase 27 286 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2179 Alju-ChrAlju03 48923996 48926275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2179 315 457 Calmodulin-binding Proteins AT2G22960 28.671 1.12e-14 70.5