Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2178 ATGCTCATGGATTCAGACTATCAACTTCACAAGACTTCTCCAGAAGGTTTACTCAAGTCTGGCATATTTCTTCGCAGCCTCTCACTCCGTCTCGCTTCTCCTGTTCTTGTCTACTCAATGGCAAAGCGCTTGGCTCCCTTGCTTAATCGCGTTTTGGTGGAGAAGATCCTCCCTCCATCCAAGACCAACGCGGGAATCTTGCTACCAGAGAAATCCAATAAGCTGAATTCTGGAAAAGTTATTGCCGTGGGCCCTGGCATTTGTGATAAAGAGGGAAAGCTAATTCCTGTTCCTGTAAAGGAGGGTGACACTGTCCTTTTACCTGAATATGGAGGATCGGAGGTGAAGCTTGGTGACAAAGAGTATCATTTATATCGTGACGAGGACCTACTGGGGACGTTGCATGATTGA 411 0.4672 MLMDSDYQLHKTSPEGLLKSGIFLRSLSLRLASPVLVYSMAKRLAPLLNRVLVEKILPPSKTNAGILLPEKSNKLNSGKVIAVGPGICDKEGKLIPVPVKEGDTVLLPEYGGSEVKLGDKEYHLYRDEDLLGTLHD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2178 136 SMART Cpn10_2 43 134 IPR020818 GO:0005524|GO:0006457|GO:0044183
Alju03g2178 136 FunFam 10 kDa chaperonin, mitochondrial 37 136 - -
Alju03g2178 136 SUPERFAMILY GroES-like 42 135 IPR011032 -
Alju03g2178 136 Gene3D GroES chaperonin 38 136 IPR037124 GO:0006457
Alju03g2178 136 PANTHER 10 KDA HEAT SHOCK PROTEIN 40 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Alju03g2178 136 Pfam Chaperonin 10 Kd subunit 44 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Alju03g2178 136 CDD cpn10 43 134 IPR020818 GO:0005524|GO:0006457|GO:0044183
Alju03g2178 136 PRINTS 10kDa chaperonin signature 100 112 IPR020818 GO:0005524|GO:0006457|GO:0044183
Alju03g2178 136 PRINTS 10kDa chaperonin signature 121 134 IPR020818 GO:0005524|GO:0006457|GO:0044183
Alju03g2178 136 PRINTS 10kDa chaperonin signature 65 86 IPR020818 GO:0005524|GO:0006457|GO:0044183
Alju03g2178 136 PRINTS 10kDa chaperonin signature 44 59 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2178 Alju-ChrAlju03 48921002 48923455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2178 42 135 Calmodulin-binding Proteins AT5G20720 41.667 6.30e-14 64.7