Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2172 ATGGAGAGGTACAAGTTAATCAAGGAAGTTGGTGATGGAACATTTGGGAACGTCTGGAGAGCTATAAACAAACAAACTAGTGAAGTTGTAAGTGTTGTTGGCATGTCAAACTATGTAGTTCTTGACAGCTTATTTGAAATTGCAGTATGGACATTTTCACCGCGACCTGAAGTCAGGTATCGAGCTCCGGAAGTGCTGCTTCATTCTTATCTCTATGGTTCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGTTCAACTTTTCACTCTCCGCCCTCTTTTTCCTGGTGCCAGTGAAGCAGATGAGATGTACAAAATATGCAATCTTGCTAGTGTTTATCTTTCTGTTCTAATCCCCTCTGCAAGTATTGATGCTATCGACCTTATGACACACTTTGCATATGGGATCCCAGCAAGAGGCCGACAACTGCTGAGGCCTGAGGCCCTTCAACACCTATTCTTCCAGCCCCTGCTAAGCATCTTTGCTTCACTTTTCCCTTTTTTCCCTCCATTCCTCTCTAGTAATTTCACCAAGTTTTCTTGCCTTGGATTCGCCATCATCATTTCGCTTTCTGTTCTAGCTACGGATCATTGCTGCTTAATTGCCGTCATTATTCTTTATTGGCATTGTTTGTTCATGCACCTGCTTTCCTTACTAATTCACACGGATCATTCCCCTTCTTGGATTCTTCATTCTTTCTACGACTTCCCCTGA 717 0.4282 MERYKLIKEVGDGTFGNVWRAINKQTSEVVSVVGMSNYVVLDSLFEIAVWTFSPRPEVRYRAPEVLLHSYLYGSEVDMWAMGAIMVQLFTLRPLFPGASEADEMYKICNLASVYLSVLIPSASIDAIDLMTHFAYGIPARGRQLLRPEALQHLFFQPLLSIFASLFPFFPPFLSSNFTKFSCLGFAIIISLSVLATDHCCLIAVIILYWHCLFMHLLSLLIHTDHSPSWILHSFYDFP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2172 238 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 59 113 - -
Alju03g2172 238 Pfam Protein kinase domain 58 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2172 238 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
Alju03g2172 238 Gene3D Transferase(Phosphotransferase) domain 1 59 111 - -
Alju03g2172 238 SUPERFAMILY Protein kinase-like (PK-like) 59 157 IPR011009 -
Alju03g2172 238 SUPERFAMILY Protein kinase-like (PK-like) 1 37 IPR011009 -
Alju03g2172 238 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2172 238 SMART serkin_6 4 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2172 Alju-ChrAlju03 48876227 48882284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2172 60 158 Core Cell Cycle Gene Families AT3G48750 28.226 5.92e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Alju03g2172 Pkinase 2.9e-09 CL0016