Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2166 ATGGCATCAAGCTCAATGTCATCTTCAGGGTCATGGTCTGCGAAGGACAATAAGGCCTTTGAGAGGGCTCTGGCAATTTATGACAAGGACACTCCTGACCGTTGGCACAATATTGCAAAGGCTGTTGGAGGCAAAACTGCTGAGGAAGTAAAGAGACACTACGATCTCCTTGTGGAGGACGTGAAGCACATTGAGTCAGGACGAGTGCCCTTTCCTAATTACAGGAATACTGAAGACTCTGACCAGGGAAAAAGGCTGAAGAACTTGAAGCTCCAGTGA 279 0.4767 MASSSMSSSGSWSAKDNKAFERALAIYDKDTPDRWHNIAKAVGGKTAEEVKRHYDLLVEDVKHIESGRVPFPNYRNTEDSDQGKRLKNLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2166 92 MobiDBLite consensus disorder prediction 68 92 - -
Alju03g2166 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Alju03g2166 92 SMART sant 8 60 IPR001005 -
Alju03g2166 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Alju03g2166 92 Gene3D - 2 71 - -
Alju03g2166 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Alju03g2166 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Alju03g2166 92 FunFam Transcription factor SRM1 4 71 - -
Alju03g2166 92 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Alju03g2166 92 CDD SANT 18 54 IPR001005 -
Alju03g2166 92 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2166 Alju-ChrAlju03 48840061 48840441 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju03g2166 Myb_DNA-binding 8.5e-07 CL0123