Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2156 ATGAAGGAGGACGACACGAATTGGTTCTCGAGATGGGAAGAGGGACTTCCTTCCCTAAACGAACTCACGCCTCTCTCCCAAACCCTAATCACGCCTGATCTTGCCATGGCTTTCGATATCCGAAACCCACATAGCAATAGCCCTCACCATCAAATCCCTCAACCTCCACCTCCTTCCAATCCCTTACCTTCTCCCGGAAATCCCTCACAACCCAACTCTGCTGAATTTGCCGATTCCGGCGAGCTGGGTTCTGGAACCGCCGGTGAAGAGCCGGCTCGAACCCTCAAGCGCCCTCGCCTTGTCTGGACTCCACAACTTCACAAAAGGTTCGTGGACGCCGTTGCTCACTTGGGTATCAAAAATGCTGTGCCGAAAACCATAATGCAGCTGATGAGTGTGGACGGGTTGACCCGGGAAAACGTGGCCAGTCATTTGCAAAAATATCGACTTTACTTGAAGCGCATGCAGGGACTATCCGCCGGTGGCAGCGGTGGCGGCGCAGGCGGAGCTGGGTTGGGTGCCTCCTCCGATCCTGCCACTGATCATCTATTTGCAAGCGCCCCTGTGCCGCCCCATTTCTTACATCCCGCAGCTAGGTCCAATTCCGACCATTTCTTGCCGTTCGTGCCCGTTCCGGCTGCTCTGCAGCATCACCAGCAGCATATGGCAGCGGCTGTGGCAGCCGCCGCCCACCCACAATTGCAGCAGCAGTATCACAGACAAGTGGGCCATTTTGGGTCGCCGCCGAATGGGAGCTTCGAGCATCCGTTTCTGACAAGGCAGCCTCAACCACTTCATAGGATGGGTCAAGCAATGCAGCACAATCCAGTACCTGGATATGTAGAGGATATGGAATCGGCTAACGCAGCTGGAGGGAGAAAGGTTCTTACTTTGTTTCCAACCGGAGATGATTGA 915 0.5497 MKEDDTNWFSRWEEGLPSLNELTPLSQTLITPDLAMAFDIRNPHSNSPHHQIPQPPPPSNPLPSPGNPSQPNSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGSGGGAGGAGLGASSDPATDHLFASAPVPPHFLHPAARSNSDHFLPFVPVPAALQHHQQHMAAAVAAAAHPQLQQQYHRQVGHFGSPPNGSFEHPFLTRQPQPLHRMGQAMQHNPVPGYVEDMESANAAGGRKVLTLFPTGDD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2156 304 Pfam Myb-like DNA-binding domain 101 149 IPR001005 -
Alju03g2156 304 MobiDBLite consensus disorder prediction 49 68 - -
Alju03g2156 304 MobiDBLite consensus disorder prediction 39 96 - -
Alju03g2156 304 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 274 IPR044841 GO:0003700|GO:0006355
Alju03g2156 304 SUPERFAMILY Homeodomain-like 94 154 IPR009057 -
Alju03g2156 304 Gene3D - 94 156 - -
Alju03g2156 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 153 IPR017930 -
Alju03g2156 304 FunFam Two-component response regulator 93 156 - -
Alju03g2156 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2156 Alju-ChrAlju03 48769031 48769945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2156 1 304 G2-like Transcription Factor Family AT3G10760 59.312 6.93e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g2156 Myb_DNA-binding 2.2e-08 CL0123