Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2153 ATGTCTGACCCATCACCATCTCCTGATACGAGTTCTGTTGATTTCACTGAGCTTATCAATAACCTCCCTTCACAACCTATGGATTCTCTCCTTTTCGCCGGTGATGACGATGATGCCTTGTTTTCTGAAGCATTTCCCTCCGATTTTGACTTAGGGTTGGATGGCGATTTCGAGATTAACTTGGACGATCTTCCCTTTAATGTTGACGAATTCCTTTTCGACGACGCATCTGTTATTCCTCCCTCCCAGTTGCAGATTAATGATGATCGTCATGGCGTCGCTAATTGCAGCAGTCTGACTTCCGACGTAGCTAGGTTTTCGAATTCGCAGTCTTATCCGCCTCCTTGTTTAGATAATTCAAGCTATCAGAATCTGCATGCCTCAAATGAGGCTAAAGTTTCGAACTTCCAATCGCCGGAGTCTGATCCATGCGACCGGGAATCTTCGGGTGGGCCCGTTTCATCTCATGGTTCGGCTAACGGCGGGTCAGGTGTTTCTGATGCTACGGATTCACCTTCACCGACCCGATACGACAGAGATTTTACATCTCAGGTTATTGTTGATGAGAACCTAAAGTTGGATGAAATTGGGAAGGGCTCTGATTTGAAGAGGAAGATGGAAAACAATGGAGGAAATGCTGAGGCGAGAACTACTAAGCACCGGAAGTCGTCAACGCCTGTGGAGAATGCTACTCGAGAGCCTGGTGTTAGTGTTATCAATGGGGACGACGAGAAAAAGAAGGCTAGGTTGCTGAGGAATCGGGAAAGTGCCCAGCTTTCTAGGCAGAAAAAGAAGCAGTATGTGGAGCAGCTTGAGGAGAAGGTGAAATCGATGCATTCGACCATTGCCGGTTTGAGTAGCAAGATATCATTCGTCATGGCCGAGAATACTACTTTAAGACAGCAATTGAGTGCTGGTGGAATGTGTCCACCGCCTCCTGCTCCGGGCATGTACACCCATCCTCCGACGCCCACCATGCCTTATTCTTGGGTGCCGTATGCCCCCTATGTTGCTAACCCACTAGGGCCCAAGGTTCCTTTGGTACCAATTCCGAGATTGAAGTCTCAGCAACCGGCATCGGCCTCAAAGAGTAAAACGTCTGAGCGCAAGAAATCTGAGGGTAAAACTAAAAAGGTTGCCAGTGTCTGTTTTGTAGGTTTGTTATTCTTTGTCTTGCTTTTTGGTGGATTGGCTCCCCTTGTGAATGTTAAGTTTGATGGTTTAGTGGACGATACTTATGGGAGGTCGCAGTATGTTAGCGATAGGTTCTATGGTCAGCTTGGAGGTAAAGTCTGGCCCGTAAATGGTCCTATGAATAGGTCTGAAGGATACAAAAGAGCAGGATCTTCTAGTGAATTTGTTCATCTGGGCAATACTAGTCAGCCTCTTTTTGCTTCTTTGTATGTTCCTAGGAATGACAAGATGGTGAAGATTGATGGGAATCTGATAATCAATTCTGTCTTGGCCAGTGAGAAAGCTAGGGCATCTCAAACTGCTCATATTGCAAACAATGATAGAAGAGAAACTGGGTTGGCAATTTCTAAATATTGGGATTCTGCATTGGCTATTCCGGAAGTTGGAATAAATAGAGGTTCACATCCTTACTCTTATAGGAGTCCGCCTGAACAGAGTAAGGCACTTCCAGATGGTTCAGCTCAGATTTTGGAGGGCCATCTGAAGTTACCTACACCTTATGGTAAAATCCAACAGTTGTTCCTGGAAGGTCTTGCAGGGCCCATGTTAAGTTCTGGCACGTGCACAGAAGTTTTCCAATTTGATATCTTATCAAGACAAGGAGCTATTGTGGCAGCATCATCAGCAGGCAATGTTTCTGAAGAGAACCATCAGAATGCTACTCGTGTGAGCAAAAGTAGGAATAGAAGAATTCTCCTTAGGTTTCCAGTTGGTGGATCCAGTAGCAACGCAAGTGAAGAACAAGGAGGAGGAAATCCACTGAATGACAACTTACCTGGTAACAGGTCCAAGTCTTCCATGGTGGTTTCTGTGCTTGTTGATCCCGAAGAGGCTGCAGATTTTGGTGGAATGGTGGCGCCAAAGTCGCTTTCTAGAATATTTGTGGTTATGCTTGTGGACAGCATCAAGTACGTAACATATTCGTGTGTTCTTCCTCACGCTTCTCCCCATCCCCATCCCCATCCCCATCCCCATCCCCATCCCCATCCCGGATCACTGCTTGAGGACAACGATCCTTCCATCAAGCTTTTTGACTGA 2232 0.4619 MSDPSPSPDTSSVDFTELINNLPSQPMDSLLFAGDDDDALFSEAFPSDFDLGLDGDFEINLDDLPFNVDEFLFDDASVIPPSQLQINDDRHGVANCSSLTSDVARFSNSQSYPPPCLDNSSYQNLHASNEAKVSNFQSPESDPCDRESSGGPVSSHGSANGGSGVSDATDSPSPTRYDRDFTSQVIVDENLKLDEIGKGSDLKRKMENNGGNAEARTTKHRKSSTPVENATREPGVSVINGDDEKKKARLLRNRESAQLSRQKKKQYVEQLEEKVKSMHSTIAGLSSKISFVMAENTTLRQQLSAGGMCPPPPAPGMYTHPPTPTMPYSWVPYAPYVANPLGPKVPLVPIPRLKSQQPASASKSKTSERKKSEGKTKKVASVCFVGLLFFVLLFGGLAPLVNVKFDGLVDDTYGRSQYVSDRFYGQLGGKVWPVNGPMNRSEGYKRAGSSSEFVHLGNTSQPLFASLYVPRNDKMVKIDGNLIINSVLASEKARASQTAHIANNDRRETGLAISKYWDSALAIPEVGINRGSHPYSYRSPPEQSKALPDGSAQILEGHLKLPTPYGKIQQLFLEGLAGPMLSSGTCTEVFQFDILSRQGAIVAASSAGNVSEENHQNATRVSKSRNRRILLRFPVGGSSSNASEEQGGGNPLNDNLPGNRSKSSMVVSVLVDPEEAADFGGMVAPKSLSRIFVVMLVDSIKYVTYSCVLPHASPHPHPHPHPHPHPHPGSLLEDNDPSIKLFD 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2153 743 MobiDBLite consensus disorder prediction 198 239 - -
Alju03g2153 743 CDD bZIP_HY5-like 246 296 - -
Alju03g2153 743 MobiDBLite consensus disorder prediction 633 660 - -
Alju03g2153 743 MobiDBLite consensus disorder prediction 151 180 - -
Alju03g2153 743 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 306 IPR004827 GO:0003700|GO:0006355
Alju03g2153 743 MobiDBLite consensus disorder prediction 636 660 - -
Alju03g2153 743 Coils Coil 254 288 - -
Alju03g2153 743 Gene3D - 243 307 - -
Alju03g2153 743 MobiDBLite consensus disorder prediction 198 227 - -
Alju03g2153 743 Pfam bZIP transcription factor 245 303 IPR004827 GO:0003700|GO:0006355
Alju03g2153 743 SUPERFAMILY Leucine zipper domain 245 303 IPR046347 GO:0003700|GO:0006355
Alju03g2153 743 SMART brlzneu 241 305 IPR004827 GO:0003700|GO:0006355
Alju03g2153 743 MobiDBLite consensus disorder prediction 132 183 - -
Alju03g2153 743 MobiDBLite consensus disorder prediction 715 743 - -
Alju03g2153 743 MobiDBLite consensus disorder prediction 354 373 - -
Alju03g2153 743 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 54 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2153 Alju-ChrAlju03 48757583 48760701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2153 152 715 bZIP Transcription Factor Family AT2G40950 48.398 3.47e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju03g2153 bZIP_1 4.7e-11 CL0018