Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2145 ATGGCATTGTCTTCTCTGGTTTCCACTCTCCAAAACGAAGAGAATTTCAAACAAGAGACTGACTTCCCTGAGGCTCAAATCGGAAACGAGGGCCTCACGAAACGCATCCTCAAAACTGGACTCTCATGGCAAACTCCGTCTCCTGGAGACCAAGTCCAAGTTCATTTCACAGGTCATGTTCTTAATGGAGCATCCCTTCAATCAAGTTACGAACAAGGGACCCCATTTCGCTTCAACTTAGGCCAATGTGAAGTTATCAAAGGCTGGGATGCAGGAGTTGCAACCATGAAGAAGGGAGAGAGAGCAGTCTTCAAAATACCACCAAGCTTGGCGTATGGGGAGAAAGGTTCTCCACCATTGGTTCCTCCCAATGCGACTCTCATCTTTGAGGTTGAGATGCTGTCTTGGATTACCGTCAGGGACTTGACTGGTGATGGAGGAATCCTGAAAAGGATCATAAGGGAGGGAGAGGGATGGGAGACTCCTAGAGACGCTGACGAGGTCTTAGTGAAATATGAGGCAAGGCTAGAGAATGGAATGATTGCTCATAAGTCTAATGAAGGTGTAGGGTTTACTATAAGTGATGGCCATCTTTGTCCAGCCATGAGTATAGCATTGAAAACAATGAGAAAAGCGGAGGAAGCAGAGCTCAGTTTAAGATTCTCTTATGGAATGATACAAAATTCAAGTAGAAACAGTGAAACCAATGGCAGTGCCCAACCAGATTCTAATTTAACAAGTCTAAGACTAGAGCTGGTATCATGGAAAACTGTAGTTGATGTCACAGGAGATAAGAAGGTACTCAAGAAGATTGAGATAGCTGGAGAGGGATTTGAGCGTCCTAATGAAGGATCACAAGTGAAAGTAACATATACCAGTAAACTAGAAGATGGAACAATTATTGAGAGGAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAACTCAGGAAGAACAAGCACCTGAGGGGCTAGAAAAAGCAATCATGACAATGAGAAAAGGAGAGGAAGCCACTGTGTCCATCACCGCCGAATATTTATCTGATCTTCCCACCACCCCAGCTAATAATAAAGTCCTTTATTATGAGGTCCAGTTGGTTGATTTCATCAAGGAGAAGCCATTTTGGAAAATGAACACTAAGGAGAAAATAGAAGCTGGTGAGAGGAAGAAGCATGACGGAAATTTATTGTTCAAGGCTGAAAAGTTCAGGCGTGCATCCAACAAATATGAAAAGGCTGTAAAATGCATAGAGCTTGATCACTCATTCAGTGATGATGAGAAAAGCCTAGCCAATGCCTTACGGATATCTTGTTATTTGAACAATGCTGCTTGTAAACTTAAATTGGGGGAGTATACTGAAGCCTCAAAACTCTGTACTCAGGTTCTGGAACAAGATCCATTAAATGTGAAGGCACTGTACAGAAGATGCCAGGCATACCTGAAAACATCAGACTTAGAGAAAGCTGAGGCTGACATTAAAAGAGCCCTCACTATTGATCCAAACAACAGAGACATGAGAGTGGAATACAGGGAGCTGAAACTTAAGCAAAAGGAATACAGTAAATATGAAGCTGACATCTTCAGCTCAATGCTGTCAAAGATAGGCTAA 1608 0.4266 MALSSLVSTLQNEENFKQETDFPEAQIGNEGLTKRILKTGLSWQTPSPGDQVQVHFTGHVLNGASLQSSYEQGTPFRFNLGQCEVIKGWDAGVATMKKGERAVFKIPPSLAYGEKGSPPLVPPNATLIFEVEMLSWITVRDLTGDGGILKRIIREGEGWETPRDADEVLVKYEARLENGMIAHKSNEGVGFTISDGHLCPAMSIALKTMRKAEEAELSLRFSYGMIQNSSRNSETNGSAQPDSNLTSLRLELVSWKTVVDVTGDKKVLKKIEIAGEGFERPNEGSQVKVTYTSKLEDGTIIERKGSEEEPFEFTTQEEQAPEGLEKAIMTMRKGEEATVSITAEYLSDLPTTPANNKVLYYEVQLVDFIKEKPFWKMNTKEKIEAGERKKHDGNLLFKAEKFRRASNKYEKAVKCIELDHSFSDDEKSLANALRISCYLNNAACKLKLGEYTEASKLCTQVLEQDPLNVKALYRRCQAYLKTSDLEKAEADIKRALTIDPNNRDMRVEYRELKLKQKEYSKYEADIFSSMLSKIG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2145 535 SMART tpr_5 386 419 IPR019734 GO:0005515
Alju03g2145 535 SMART tpr_5 435 468 IPR019734 GO:0005515
Alju03g2145 535 SMART tpr_5 469 502 IPR019734 GO:0005515
Alju03g2145 535 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 134 IPR001179 GO:0003755
Alju03g2145 535 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 160 233 IPR001179 GO:0003755
Alju03g2145 535 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 280 366 IPR001179 GO:0003755
Alju03g2145 535 FunFam Peptidyl-prolyl cis-trans isomerase 24 137 - -
Alju03g2145 535 Gene3D - 257 371 IPR046357 GO:0003755
Alju03g2145 535 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Alju03g2145 535 SUPERFAMILY FKBP-like 142 224 - -
Alju03g2145 535 Pfam Tetratricopeptide repeat 469 502 IPR001440 GO:0005515
Alju03g2145 535 Gene3D - 140 256 IPR046357 GO:0003755
Alju03g2145 535 SUPERFAMILY FKBP-like 20 139 - -
Alju03g2145 535 PANTHER PEPTIDYLPROLYL ISOMERASE 14 135 - -
Alju03g2145 535 SUPERFAMILY TPR-like 375 531 IPR011990 GO:0005515
Alju03g2145 535 Gene3D Tetratricopeptide repeat domain 372 529 IPR011990 GO:0005515
Alju03g2145 535 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 284 369 IPR001179 GO:0003755
Alju03g2145 535 Gene3D - 8 139 IPR046357 GO:0003755
Alju03g2145 535 ProSiteProfiles TPR repeat profile. 469 502 IPR019734 GO:0005515
Alju03g2145 535 FunFam Peptidylprolyl isomerase 374 529 - -
Alju03g2145 535 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 165 256 IPR001179 GO:0003755
Alju03g2145 535 SUPERFAMILY FKBP-like 260 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2145 Alju-ChrAlju03 48681471 48684612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2145 24 534 Calmodulin-binding Proteins AT5G48570 54.702 0.0 571