Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2144 ATGTCTGAGAGAATGAATGTGGGAGGTGGTGAGGACAAAAAGATGAAACGTAAGCTTGAGGAGGATCATCATGAGACTGCGGAAGAACATTTTCTGTCTCTGTCACTCTGCAACAACGCCGACATGTCGAAACCTTTGAAGGTGTCCCCGAAACCTGCTTCATCTAGTTCTGGTGATGGTGATGATGATAATAATAAGAAACCTGAATCAGAGGGAAGGAGGACGAAGGAGTTTGGGTGCAAGTTCTGCGTAAAGAAGTTCAAAAGCTCGCAAGCTCTGGGAGGTCACCAGAATGCTCATAGGAGAGAGAGAGTCATCTACAAGATGGAGAAGGAACTCAGTACTTTTGGACACCCTAACTTTTGTCCCTGTTCCTCCATTATCACTCACAATAATCTTCCCATACCAATAATCTCTCGTGCTACTACTTCGTCTGCTTCTGCTTCATCTTCAGCCTTCAATCCTCATTTTCATCTTCATCATCACGCCATTGCGACCCATCACCACCATTTTCATCGTCAAGGCCAACCAGTACCTGGTTTATCCTTTGGGATGAACACTTCTGGGAATACTCCAGATGTTGAGCAAAAGAAGCCTGATGTGTCCTCAGGTCTCGACTTGTCCCTCAGACTCTGA 636 0.456 MSERMNVGGGEDKKMKRKLEEDHHETAEEHFLSLSLCNNADMSKPLKVSPKPASSSSGDGDDDNNKKPESEGRRTKEFGCKFCVKKFKSSQALGGHQNAHRRERVIYKMEKELSTFGHPNFCPCSSIITHNNLPIPIISRATTSSASASSSAFNPHFHLHHHAIATHHHHFHRQGQPVPGLSFGMNTSGNTPDVEQKKPDVSSGLDLSLRL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2144 211 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Alju03g2144 211 MobiDBLite consensus disorder prediction 1 26 - -
Alju03g2144 211 PANTHER ZINC FINGER PROTEIN 5 52 211 IPR044299 GO:0010090
Alju03g2144 211 Gene3D Classic Zinc Finger 54 116 - -
Alju03g2144 211 MobiDBLite consensus disorder prediction 173 211 - -
Alju03g2144 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Alju03g2144 211 MobiDBLite consensus disorder prediction 180 197 - -
Alju03g2144 211 MobiDBLite consensus disorder prediction 42 73 - -
Alju03g2144 211 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2144 Alju-ChrAlju03 48676675 48677310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2144 72 136 C2H2 Transcription Factor Family AT1G67030 39.706 2.47e-11 58.9