Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2121 ATGGAAAGCTTTTGCACGGACGACATAGCCTTTGTGCTTTTCAAGAAGGCCAAATCTTTTCCTCGAGGACCTGATAAAATTTCAAACAAACTCAAAAATCCAAACAATGCCAAGAATGACGTTCTTTTGATAAGAGGTCTTCCGGAGTTTGTTTATTTGTTGCCTTACCATCTTCCCCTTCGGATTCTCGAGTCTAATTTCGTCTTTGTAGTCGGTATAACTATGTATCACGCAAAGAAGTTTCCCCCGGGAACTGTCGTGCCAAATAAAGCTCAAGGTGGTGCTGAGCAGCTTGCGAGTATAGCGGATTTGAGTGGAACTGCAGTGAAAAATTCCACGCCTGTGGGAGGAAGTGGGAAACAACGATTACGGTGGACGTCAGATCTTCATGACCGTTTTGTGGATGCCATTACGCAACTCGGTGGACCAGATAGGGCAACTCCAAAAGGCGTACTGCGGGTTATGGGCGTACCTGGACTCACGATTTATCATGTTAAAAGCCATTTACAGAAATACCGCCTTGCAAAGTACCTGCCAGAGTCTTCAGCTGACGAGTCTAAGGATGAGAAAAGGAATTCTGGAGACACTGTATCTGGCACAGATTCTTCCCCGGGACTGCAAATCAGTGATGCTCTGAGGATGCAGATGGAGGTTCAGAAACGTCTCCATGAACAGCTAGAGGTTCAAAAGCAGTTACAGATGAGAATTGAAGCACAGGGTAAATACTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGAAATACCTTGAGAGCTTCGGAAACACTACCATCATCAAGAGATGAGCAAGATCCTGCGCGATCAGAACCTTCAGGTGATGACGCTTCTGCAGAGACAGAGTCTCCGTTGAAGAAACAGAGAGTTGATGATGGCTCCGAGAGTGGCGTCACCACCCTCCCGGCTACCAGTAAAGATTGCACAGAAGACTGA 951 0.4637 MESFCTDDIAFVLFKKAKSFPRGPDKISNKLKNPNNAKNDVLLIRGLPEFVYLLPYHLPLRILESNFVFVVGITMYHAKKFPPGTVVPNKAQGGAEQLASIADLSGTAVKNSTPVGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDEKRNSGDTVSGTDSSPGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLRASETLPSSRDEQDPARSEPSGDDASAETESPLKKQRVDDGSESGVTTLPATSKDCTED 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2121 316 FunFam Myb family transcription factor 119 177 - -
Alju03g2121 316 MobiDBLite consensus disorder prediction 180 195 - -
Alju03g2121 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 177 IPR017930 -
Alju03g2121 316 Gene3D - 119 178 - -
Alju03g2121 316 MobiDBLite consensus disorder prediction 256 316 - -
Alju03g2121 316 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 118 283 IPR044848 GO:0003700
Alju03g2121 316 Pfam MYB-CC type transfactor, LHEQLE motif 206 252 IPR025756 -
Alju03g2121 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 120 175 IPR006447 GO:0003677
Alju03g2121 316 MobiDBLite consensus disorder prediction 299 316 - -
Alju03g2121 316 MobiDBLite consensus disorder prediction 180 207 - -
Alju03g2121 316 MobiDBLite consensus disorder prediction 264 298 - -
Alju03g2121 316 Pfam Myb-like DNA-binding domain 123 173 IPR001005 -
Alju03g2121 316 SUPERFAMILY Homeodomain-like 119 174 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2121 Alju-ChrAlju03 48520625 48525757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2121 103 297 G2-like Transcription Factor Family AT4G28610 46.040 4.22e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju03g2121 Myb_DNA-binding 3.3e-06 CL0123