Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2110 ATGGCGAGCAGAAAGGAAGAAGAAAGAAACGAGAAGATTATTAGAGGACTTATGAAGCTTCCGCCTAACCGAAGATGTATCAACTGCAATAGTCTGGGCCCGCAATATGTCTGTACTACTTTTTGGACCTTCGTTTGCATGACATGCAGTGGGATACATCGTGAGTTTACTCATCGAGTTAAGTCTGTATCTATGGCAAAATTCACTTCTCAGGAGGTAGAAGCTCTTCAAAATGGTGGCAACCAGCGTGCAAGGGACATATATTTGAAAGATTGGGATTTCCAAAGGCAGCGGATGCCTGATAGCAGCAATGCTGACAAAATAAGGGAGTTTATAAGGAGTGTGTACATTGACAGAAGATATGCTGGAGCAAGGTCCTCTGACAAACCTCCAAGAGATACACAGAGCCCTAGAATCCTTGGAGATGACACAAGGCGAGCTAGCTCTTATCATTCATATTCTCAAAGTCCTCCATATGATTACCAATATGAAGATCGACGGTATGGAAGACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGATAAAGGTCGCTATGAAGGGAAGATGTCTAGTATTATGTATAGCCCTGGGCGTTTCAGTGACCATGCATCTGAGGATGGCTTTGCTAATGAGGGATCCGGTCCAAGAATTTCAGACTATTCTGTGTCTAGTGCTGGTGAACAATTCAAATCTGCTGTGCATTCTCCCAAGTTTTTTAGGGACATGCGAAGCAGTCCATTCCATCAGTGTTCTAGTGCTGGTTCAAGTGAAGATTTATTTTCTCCATCACGGTTTACATCTCTGGAAACAATTGTCAAGGGTGATTCAGATGGATATCATCCACAGAGAACCACGCCACAGGGATCAACTGCTTGCAATCCATCGCCCCATAGATCTTACAGTTCTGGTGGTCTAGATTTATTTTCAGAGCCTGTCCAAGCTTCTGGATCCAATCAAGATAAGGTGTCTGCCGTACCAGTATCACAACAAACACGTCCAGCAAGATCAGTTAGTTTGGATCTTTCAAAGGCAGCAGTGACATCCGAGCCGCTGCCCTCCTTAATGCCGCCTATTGATCTTTTTGAGTTTCCAGCATTGTCTCAGGCTCCACCACTGGATTTGTTTCAACCATCTATATTGTCTTCAGCTCCTTCTTCAAATGAAAATCAACCTTCACAAACATCCCAGCCCTCATCTATCGACTTCTTTGCAGATGTTTCTAAGCAGAAGCCTGCTGCTCCTTCAGATGAGAAGTCACCAGAGTTCTTTGTCCCTAAAAATGAAGGATGGGCAACATTTGATATCCCTCAGCAATCGGCATCTCCTGCACGAGTTGAAATTCCAGCAGGAGTTCCTTCAACTGACAAGTCTTTGCTGGAATTATTTGATCCATTTTCAACGGCAAATGCCAGCCAGCAGTGGCCATCTTTTGACACTTCTGGTGCTCATGAACCTTCAATCACTTCTAATGCATGGCATGGTGGTGTCCAGAATGGAGAACAAGCTTCCGTTGCTGCAGAAAATGCTCAACCATGGAATGCATTTGAAAATTCTGGTTCCCACCTTCCTGTAGATGCTGTCAATCGAGAGTTGCAGTTGCATAATCCTCCATCAAGTGATGATCAATTTTTAAGCTCAAAAGTTTCTGAGGGTTCCAAAGGTGGGGTGCAAGACTTTGTCCCTATTGGTGCATTCAATGATAATATTCAATCAGATGTTAGTGGTTTACCATTTCCTCCACCTGTGCTTCCTTTGATGGAAGAGACTCAACGCAGTGCAACCAACCAGAAATCAACTAATCCATTTGATCTTCCCTATGAATCTGATGTAGAGCACAATAATATGTTTCTTGATCTGAGCTCATTGCAAGCTGCTCTGCCAGATTCCCAGTTGGCTTCTCCATACCATGGTGGTAATGGTATAGCTGAACCATGGCTCCCGCAAAGTGTGACCCCCTATATTTCTTCTGCAGGACAAGGCGGTCTAACGTTCATGGCTGCGCAGCCACCAAGCTCTCAAATACCGAATATCCAGACGCAAGGACCAGTTGCATCTTTTGGGGGCAATCCTTTTGCATAG 2082 0.4452 MASRKEEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDIYLKDWDFQRQRMPDSSNADKIREFIRSVYIDRRYAGARSSDKPPRDTQSPRILGDDTRRASSYHSYSQSPPYDYQYEDRRYGRQAAALTRKPGSDKGRYEGKMSSIMYSPGRFSDHASEDGFANEGSGPRISDYSVSSAGEQFKSAVHSPKFFRDMRSSPFHQCSSAGSSEDLFSPSRFTSLETIVKGDSDGYHPQRTTPQGSTACNPSPHRSYSSGGLDLFSEPVQASGSNQDKVSAVPVSQQTRPARSVSLDLSKAAVTSEPLPSLMPPIDLFEFPALSQAPPLDLFQPSILSSAPSSNENQPSQTSQPSSIDFFADVSKQKPAAPSDEKSPEFFVPKNEGWATFDIPQQSASPARVEIPAGVPSTDKSLLELFDPFSTANASQQWPSFDTSGAHEPSITSNAWHGGVQNGEQASVAAENAQPWNAFENSGSHLPVDAVNRELQLHNPPSSDDQFLSSKVSEGSKGGVQDFVPIGAFNDNIQSDVSGLPFPPPVLPLMEETQRSATNQKSTNPFDLPYESDVEHNNMFLDLSSLQAALPDSQLASPYHGGNGIAEPWLPQSVTPYISSAGQGGLTFMAAQPPSSQIPNIQTQGPVASFGGNPFA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2110 693 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Alju03g2110 693 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Alju03g2110 693 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Alju03g2110 693 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Alju03g2110 693 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Alju03g2110 693 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Alju03g2110 693 MobiDBLite consensus disorder prediction 281 339 - -
Alju03g2110 693 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Alju03g2110 693 CDD ArfGap_AGFG 11 121 - -
Alju03g2110 693 MobiDBLite consensus disorder prediction 667 686 - -
Alju03g2110 693 MobiDBLite consensus disorder prediction 122 164 - -
Alju03g2110 693 MobiDBLite consensus disorder prediction 667 693 - -
Alju03g2110 693 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Alju03g2110 693 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Alju03g2110 693 MobiDBLite consensus disorder prediction 378 399 - -
Alju03g2110 693 MobiDBLite consensus disorder prediction 122 140 - -
Alju03g2110 693 MobiDBLite consensus disorder prediction 274 339 - -
Alju03g2110 693 PANTHER ARFGAP/RECO-RELATED 1 693 IPR044820 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2110 Alju-ChrAlju03 48434527 48440792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2110 14 116 C2H2 Transcription Factor Family AT4G05330 31.579 4.04e-11 63.2