Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2097 ATGGAGGATAAGGGTTGTGAGAGAAGTGAGAGAATGGCAGTAAGATCAAGATGGACTCCGAAGCCGGAGCAAATCCTAATTCTGGAGTCCATCTTCAACAGCGGCACCGTCAATCCCTCCAAGGACGAGACCGTCAGAATCAGAAAGCTTCTCGAGAAATTCGGCACCGTCGCCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGCTGCAGCAGCTCGCCGCAGAAGCCCTCCATCATCACCAGCCGAATGATCATCTCCAGCTTGACGGCGGTGCAAGTGCAAGTCCGTCTCCATATCATCAGACTAACCCTGCCTCTGATTCTTCTGCAACTTTGGCGGCTTATAATGGTGGATGCTCCTCGTCTTATATCGCTTACCAGGAACCAACGGATCAACATGCCTTCTTTTTCACTGGTGATCACATGGGTTTCCCCGAAATTGATCATGCTTCAGATTTGAGCTGCCTATCTGGGAGCATGACGGTGTTTATCAATGGGGTTGCGACAGAGGTTCAGAGGGGAGGACCTATTGACATGAAGACTATGTTTGGGGAAGACGTGACGTTAGTTCATTCTTCGGGAGTTCCACTTCCTACCAATGAGTTTGGCTTCTTAATGCAGGATTTGCAGCACGGTGAAAGCTACTTCCTGGTTGGAAAATACAATGCAGAGTTTTCATTCCTTGATTGGTGTGTGTTGAATTGGGGTTTCAGGTTTCAAAGGGAGCATAAGAAGGAAAGTGAACCGAAGCAACCGCCAACAGGAGGGTCATCGCCTCACAATACATGA 822 0.5036 MEDKGCERSERMAVRSRWTPKPEQILILESIFNSGTVNPSKDETVRIRKLLEKFGTVADANVFYWFQNRRSRSRRRQRQLQQLAAEALHHHQPNDHLQLDGGASASPSPYHQTNPASDSSATLAAYNGGCSSSYIAYQEPTDQHAFFFTGDHMGFPEIDHASDLSCLSGSMTVFINGVATEVQRGGPIDMKTMFGEDVTLVHSSGVPLPTNEFGFLMQDLQHGESYFLVGKYNAEFSFLDWCVLNWGFRFQREHKKESEPKQPPTGGSSPHNT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2097 273 ProSiteProfiles 'Homeobox' domain profile. 11 76 IPR001356 GO:0003677
Alju03g2097 273 MobiDBLite consensus disorder prediction 94 118 - -
Alju03g2097 273 SMART HOX_1 13 80 IPR001356 GO:0003677
Alju03g2097 273 FunFam WUSCHEL-related homeobox 11 15 82 - -
Alju03g2097 273 Pfam Homeodomain 15 75 IPR001356 GO:0003677
Alju03g2097 273 CDD homeodomain 15 70 IPR001356 GO:0003677
Alju03g2097 273 MobiDBLite consensus disorder prediction 254 273 - -
Alju03g2097 273 MobiDBLite consensus disorder prediction 99 118 - -
Alju03g2097 273 SUPERFAMILY Homeodomain-like 14 82 IPR009057 -
Alju03g2097 273 Gene3D - 15 83 - -
Alju03g2097 273 PANTHER WUSCHEL-RELATED HOMEOBOX 11 10 231 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2097 Alju-ChrAlju03 48354126 48356195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2097 14 254 Wox Gene Family AT3G03660 49.091 3.42e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju03g2097 Homeodomain 1.2e-13 CL0123