Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2055 ATGAACGATCTTCTATCGGTAATTAATTCATTATCCCAGGAATCATTTGAAATCCGACGTGGGCAAGGAAATGGGGACGTCGAGTTGGGGTCATATTTACGGACTTCAGGAGAATTGGGTTTGGATATGTTCTTCAAAAAGGTTCAAGAGTTTGATAAACAATTTGAGAGGCTGGGTAAGCTTCTCAGACGGCTCCAGGATGCTCACGAGGAGTCCAAAGCAGTCACCAAAGCTCCTGCCATGAAGGATATTAAGCAGAGAATGGAGAAAGATGTTGATGAAGTCAAGAAAATTGCCTATCACATAAAAGCAAGAATTGAGGAATTGGACAGAGAAAACCTGGAAAATAGGCGAAAGCGTGGGTGTGGAGAAGGAACAGGTATCGACAGGTCAAGAACAGCGACCACCATTGCCTTAAAAAAGAAACTGAAGGACAAGATGGATGAATTTCAGAGGCTGAGGGAAATCATACATCAAGAATATCGCGAGGTTTTAGAGAGGCGTGTTTATACAGTGACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTAATTGAGACTGGAGATGGTGAACAGATTTTCCAGAATGCAATTAAGGAACAAGGACGAGGCCAGATACTGGACACCCTAGCAGAAATTCATGAACGGCACGAAGCAGCTAGAGATGTTGAGAAGAAGATTCTTGATTTGCAGCAGATATATCTAGATTTGGCTGTGCTGGTTGATTCGCAGGGAGACATTCTTAACAACATAGAATCCCAGGTATCAACTGCAGTAGATCACGTGCAGCAAGGCAATAATGCACTAGTGAAGGCAAAGAAGGCACAGAAGAGTACGAGAAAATGGATGTGCATTGCTATAATAATACTTCTTCTTGTTGTTGCCATCGTTCTTACTTCTGTCCTCAAACCTTGGACTGACAAAAGAGGAGCCTAG 939 0.4302 MNDLLSVINSLSQESFEIRRGQGNGDVELGSYLRTSGELGLDMFFKKVQEFDKQFERLGKLLRRLQDAHEESKAVTKAPAMKDIKQRMEKDVDEVKKIAYHIKARIEELDRENLENRRKRGCGEGTGIDRSRTATTIALKKKLKDKMDEFQRLREIIHQEYREVLERRVYTVTGTRADEETIDRLIETGDGEQIFQNAIKEQGRGQILDTLAEIHERHEAARDVEKKILDLQQIYLDLAVLVDSQGDILNNIESQVSTAVDHVQQGNNALVKAKKAQKSTRKWMCIAIIILLLVVAIVLTSVLKPWTDKRGA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2055 312 Gene3D - 205 304 - -
Alju03g2055 312 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 211 273 IPR000727 -
Alju03g2055 312 CDD SNARE_syntaxin1-like 210 272 - -
Alju03g2055 312 SMART SynN_4 36 162 IPR006011 GO:0016020
Alju03g2055 312 Pfam Syntaxin 44 246 IPR006011 GO:0016020
Alju03g2055 312 Coils Coil 140 160 - -
Alju03g2055 312 Gene3D - 39 165 - -
Alju03g2055 312 Pfam SNARE domain 248 299 IPR000727 -
Alju03g2055 312 Coils Coil 48 68 - -
Alju03g2055 312 FunFam Syntaxin 132 204 304 - -
Alju03g2055 312 CDD SynN 41 198 IPR006011 GO:0016020
Alju03g2055 312 PANTHER SYNTAXIN 44 291 IPR045242 -
Alju03g2055 312 SUPERFAMILY t-snare proteins 40 266 IPR010989 GO:0016020|GO:0016192
Alju03g2055 312 SMART tSNARE_6 206 273 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2055 Alju-ChrAlju03 48031007 48034760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2055 1 312 SNARE and Associated Proteins AT3G03800 68.690 1.52e-147 415