Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2049 ATGGATATGGCAGCCGAGAAGAGAGAATTAGAAATCAGCAACAAGACTTCCAATGCTAACTCTAACAACACTAACCTCGACCAAATCATAGATTCTTCACCTCCTTTGGCTTCCGCTGGTAACGACACTTCTAATAAGGAGGCTGACGAACGACAGGCTCGTGAGCTCAAAGCTGGTCTTCATCCCCTAAAGCACAAATTTGTATTTTGGTATACCCGCCGTACACCTGGAGTTCGAACTCAGACATCATACGAAGACAACATAAAGAGAATTGTCGATTTCAGTACGGTGGAAGGTTTTTGGGTTTGCTATTGCCATCTAGCTCGTCCTTCCTCCTTGCCAGTTCCAACAGATTTGCATCTTTTTAAGGAAGGAATTCGCCCTTTATGGGAGGACCCAGCCAATTGTAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTTTCAGGCCGCTTTTGGGAGGACTTGGTTCTTGCCTTAGTAGGTGACCAGCTCGATTATGGGGAAAACATATGTGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGATTCGCAATGCATCTGATAATCAGGCCGTGATGGTTCTGAGGGATTCAATTAAACGTCACTTAAAGCTTCCTCATAACTATGTCATGGAATACAAGCCCCATGATGCCTCTTTGCGAGACAATTCATCCTACAGAAACACTTGGTTGAGAGGATAG 723 0.4371 MDMAAEKRELEISNKTSNANSNNTNLDQIIDSSPPLASAGNDTSNKEADERQARELKAGLHPLKHKFVFWYTRRTPGVRTQTSYEDNIKRIVDFSTVEGFWVCYCHLARPSSLPVPTDLHLFKEGIRPLWEDPANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGENICGAVLSIRFNEDILSVWIRNASDNQAVMVLRDSIKRHLKLPHNYVMEYKPHDASLRDNSSYRNTWLRG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2049 240 FunFam Eukaryotic translation initiation factor NCBP 33 233 - -
Alju03g2049 240 MobiDBLite consensus disorder prediction 14 43 - -
Alju03g2049 240 Gene3D RNA Cap, Translation Initiation Factor Eif4e 33 233 IPR023398 -
Alju03g2049 240 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 42 229 IPR001040 GO:0003723|GO:0003743|GO:0006413
Alju03g2049 240 ProSitePatterns Eukaryotic initiation factor 4E signature. 118 141 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Alju03g2049 240 MobiDBLite consensus disorder prediction 1 50 - -
Alju03g2049 240 Pfam Eukaryotic initiation factor 4E 62 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Alju03g2049 240 SUPERFAMILY eIF4e-like 43 236 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2049 Alju-ChrAlju03 47949395 47952154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2049 27 240 Eukaryotic Initiation Factors Gene Family AT5G18110 76.168 4.33e-121 342