Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2038 ATGCTCCTCTCACCTAATGGAGTCGATCCGTTAGTATTACATAAGATTATTGAAATTTTCAGAGCGACTCAAGTGGGCTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGGAGATCAAAGCGGCTTGGTGATCTTCAGCCTGCCCCACAACCTATTGAACAGAATTGCGCACAAACTGCTCCAAACAAGACCAGAAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGGAATGCCACTGCTGTAGCAAAAGGAACTTCACCAGCAGTACCCACAAGACGAACTGCAGCTGGTAGGGGCCGGGGAGGTAGATTGGTTGATCTTATTCCTGAACCTGTTGCACTTGGTGCCCCTGAACCTGTTCTTAATCGTGAAGAGGTAGCAGCCAATAATAACATTTTAATGGCGGGTGGAAGTGCGGACAAGGTGGTTGGAGCTGAAGAGGAGACATGCACAACCCCTATTCCTGAAACGGTACAGGTTGGTAGTTCTCCTTTATATAAGATAGAGACAAAGTTGGGTAAGGGTGGTTTTGGTCAAGTCTATGTTGGCAGAAGGGTAAGTGGTGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCGCTGAAGTTTGAACACAGAAATAGTAAAGGTTGCAATTATGGGCCTCCTTACGAGTGGCAAGTCTACAATACTCTGAATGGCTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGCCAAGGAGATTTCTATATACTGGTCATGGACATGCTTGGTCCCAGTCTTTGGGATGTATGGAATTCTCTTGGCCAGTCGATGTCACCAAATATGGTTGCATGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATATGAAAGGGTTTGTGCATGGAGATGTTAAACCTGAGAACTTCTTACTTGGTCAACCTGGAACAGCTGATGAGAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCTAAATGGAAGGACACATCTGGTCAACATGTTGAATATGATCAGAGGCCTGACGTGTTTAGGGGGACCATAAGATATGCCAGTGTACATGCACATTTAGGTAGGACTGGAAGTAGAAGGGACGATCTTGAGTCCCTGGCATATACATTAATATTTCTTATAAAAGGGAGGTTACCTTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGGGCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTCAAGCAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCCAACTATTCCAAGCTTGTATCATTATTTGATAGCTTGATTGAACCATCTTCTCAATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGAGGGCTAGAATGCTTTTAAATCATGAAGATGATGAGCAGCCAAAGAAGAAAGTGCGATTGGGGAATCCTGCTACTCAGTGGATATCAGTGTATAATGCACGGCGTCCCATGAAGCAGAGATATCACTATAATGTATCAGACAGTAGGCTTCCACAGCATGTAGAAAAGGGTAATGAGGATGGATTATATATCAGCTGTGTTGCCTCCTCATCAAATCTTTGGGCCCTAACCATGGATGCAGGAACGGGTTTCTCCTCTCAGGTCTATGAGTTGTCGCCAGTCTTCTTGCACAAGGATTGGATTATGGAACAATGGGAGAAAAATTACTATATCAGTTCTATAGCTGGTGCAACAAATGGGAGTTCCTTGGTTGTTATGTCCAAAGGAACTACGTACACCCAGCAGTCCTACAAGGTAAGTGAATCATTTCCTTTCAAATGGATCAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCTTGACCACTGCTGGCAGTCGATGGGGTGTTGTTATGTCCAGGAATGCAGGATATTCTGATCAGGTTGTGGAGCTTGACTTCTTATACCCAAGTGAAGGTATTCATCGGCGATGGGAGAGTGGTTTCCGGATAACATCTATGGCTGCTACCGCTGATCAGGCTGCCTTCATTCTTAGCATACCAAAACGCAAATTGCTTGATGAAACTCAAGAAACTCTACGTACTTCTGCCTTCCCTAGCACCCATGTGAAGGAAAAATGGACAAAGAATCTCTATATAGCCTCAATATGTTATGGGCGGACTGTTTGCTAG 2196 0.4422 MLLSPNGVDPLVLHKIIEIFRATQVGYDLNGERMPELRSGARRSKRLGDLQPAPQPIEQNCAQTAPNKTRRRVGGGRGRGGNATAVAKGTSPAVPTRRTAAGRGRGGRLVDLIPEPVALGAPEPVLNREEVAANNNILMAGGSADKVVGAEEETCTTPIPETVQVGSSPLYKIETKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASKWKDTSGQHVEYDQRPDVFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLVSLFDSLIEPSSQLRPIRIDGALKVGQKRARMLLNHEDDEQPKKKVRLGNPATQWISVYNARRPMKQRYHYNVSDSRLPQHVEKGNEDGLYISCVASSSNLWALTMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTTYTQQSYKVSESFPFKWINKKWKEGFHVTSLTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGFRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWTKNLYIASICYGRTVC 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2038 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Alju03g2038 731 SUPERFAMILY Protein kinase-like (PK-like) 171 457 IPR011009 -
Alju03g2038 731 CDD STKc_CK1 171 444 - -
Alju03g2038 731 MobiDBLite consensus disorder prediction 66 107 - -
Alju03g2038 731 ProSiteProfiles Protein kinase domain profile. 171 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2038 731 FunFam Casein kinase 1-like protein 143 490 - -
Alju03g2038 731 ProSitePatterns Protein kinases ATP-binding region signature. 177 208 IPR017441 GO:0005524
Alju03g2038 731 Pfam Protein kinase domain 171 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2038 731 PANTHER CASEIN KINASE-RELATED 172 693 - -
Alju03g2038 731 SMART serkin_6 171 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g2038 731 Gene3D Transferase(Phosphotransferase) domain 1 144 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2038 Alju-ChrAlju03 47875899 47881754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2038 288 444 MAP Kinase Kinase Kinase AT5G50180 25.455 8.67e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Alju03g2038 Pkinase 4.6e-16 CL0016