Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2017 ATGGAAGAGCCGGTCGTGGTGAACAAAGTTGAAGATCAGCCTCTGGATTTGCCTCCGGGCTTCAGATTCCACCCCACCGATGAGGAAATCATCACTTGTTATCTCACAGAGAAGGTCCTCAACAGCAGTTTCATTGCAACTGCCATCGGAGAGGCCGATTTGAACAAGTCCGAGCCTTGGGACTTGCCCAAGAAAGCCAAGATGGGAGAGAAAGAGTGGTATTTTTTCTGCCAAAGGGACAGGAAGTATCCGACGGGGATGAGGACAAATCGGGCCACCGAGTCCGGTTACTGGAAGGCCACTGGAAAAGATAAAGAGATTTACAAAGGCAAAGGCAACCTCGTTGGCATGAAGAAGACCCTCGTCTTTTACCGAGGAAGAGCTCCTAAAGGAGGAAAAACCAACTGGGTTATGCATGAATTCAGATTGGAAGGCAAATTCGCCACTTACAATCTCCCCAAAGCTGCCAAGGATGAATGGGTTGTTAGCAAGGTTTTCCACAAGAACCCAGATGTGAAAAAGAACCCAATTCAAGGACTTTTGAGGATTAACTCTCTCGGTGATGATTTGCTTGACTGTTCCTCACTCCCTCCTCTCATGGATCCTCCTTTCAAGGGCACCAACCCATCCCCACCGCCCATCTCATCATCTAAACCATCCGATGGCTATTATGCCCCCAACCTCTCCATCATCAACAATAATCAGCAGCCGCTGCCACAGCAGCTAATGATGAAGCCTCAGGCTATGATGATTCCCATCAACAACAATTACACCATCAATAATCATCAGGCCAATTCCAATTTCCATCCTCATCAGATTCATCAAATCCAAAATCCCAACAGCTTCACGTTTCAGCAGAATAATAATAATCCAGGTTATTTGATGAGTAATGATCAGTTTCTGAGAGCATTTGCGGCGAATAATAACGGCGGCGACAGAGGAGGCTTGTTTGGGTTGGACAAACTGTGCAAGACGGAGCCGTTGGTGTCGACGTCCGGCAACCAGTCTATGGTGAGTGTGTCGCAGGATACAGGCGTCAGCAACGACATAAACACCGACACTTCCTCCGCTGTTTCTAAGCTCCACATGGGAAAGAGCAAGGCATTGTACGAGGATCTTGAGGCTCCATCCGCTGGGCCCCTCTCTGAGTTGGAATGCCTCTGGGATTACTGA 1173 0.4834 MEEPVVVNKVEDQPLDLPPGFRFHPTDEEIITCYLTEKVLNSSFIATAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGGKTNWVMHEFRLEGKFATYNLPKAAKDEWVVSKVFHKNPDVKKNPIQGLLRINSLGDDLLDCSSLPPLMDPPFKGTNPSPPPISSSKPSDGYYAPNLSIINNNQQPLPQQLMMKPQAMMIPINNNYTINNHQANSNFHPHQIHQIQNPNSFTFQQNNNNPGYLMSNDQFLRAFAANNNGGDRGGLFGLDKLCKTEPLVSTSGNQSMVSVSQDTGVSNDINTDTSSAVSKLHMGKSKALYEDLEAPSAGPLSELECLWDY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2017 390 FunFam NAC domain-containing protein 100-like 26 172 - -
Alju03g2017 390 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Alju03g2017 390 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Alju03g2017 390 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Alju03g2017 390 Gene3D NAC domain 26 172 IPR036093 GO:0003677|GO:0006355
Alju03g2017 390 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2017 Alju-ChrAlju03 47723804 47725347 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2017 1 211 NAC Transcription Factor Family AT5G18270 72.146 1.49e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g2017 NAM 5.7e-39 No_clan