Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2014 ATGGCCAGCCCACAGTCCCATTTACCTCCAGGTTTCAGGTTTCACCCTACTGATGAGGAGCTCATTCTTCACTATCTCAGGAAGAAGGTCGCCTCGTTGCCCATACCCGTCTCCATCATTGCCGAGGTCGATATCTACAAGTTTGATCCCTGGGACTTACCTCAGAAGGCGGCGTTTGGGGATAAGGAATGGTACTTCTTCAGTCCTCGAGACCGAAAGTACCCGAACGGGGCGAGGCCAAACAGGGCGGCTGCTTCAGGGTACTGGAAGGCCACCGGCACTGATAAGACCATAGTGGCCGCGTTGCCGGGAGCTGGAGCGGCGGAGAGCATGGGGGTGAAGAAGGCTCTGGTGTTCTACACCGGAAAACCCCCCAAGGGCGTTAAGACTAACTGGATCATGCATGAGTATCGCCTCATCAACACCACCACAAACAGATCCCCCAAGTTCCAAGACCCCTCCTCCATGAGGTTAGATGACTGGGTTCTCTGCCGAATTTACAAAAAGTCCAAGTATGTTGAATCTCCTACCGCAGAAGCAGAGACCTTGGTGGCTGACCAAGATCCCCCAGAAGAGCACATAGTATTACCAAGCTCTCAATCTCCCTCTCCTCCTCCACAAAACAATCTGATTTCTCAGAAATCCTTGTCTTTCTCGAACCTGTTGGATGCCTCAGACTTCTCCATGTTGAGCAGCTTGTTATCTGACCACTATTCAACCCCACCTGGGTTTGAATCTTCTGCTGCTGCTGATGATTCTAATTCTAAAGTTATCAATCTGGACCACCAATCATTTCAAAACAATCACACCAACAACAGCTATGACTTATTTCAGAGGACCCCTCGATTGATGAACCATTCCTCCCTCCAAAACATGGAAAATAACACGCACAAGCGTCAGATTTCAGGGCTGGATCAGGAAGCCTCGTACCCATCAAAGAGGTATCTGAGCTCATCCTGCAGTTTCCCTAATAACAATACCAATCATCAACTCGACAACCCACAATGGAACTTCCTCCTCAAGCAGTCGCTGTTGAACCAGCAGTTAATCCTGGGTCCTCATCTTCGTAATCAAGCTTTATTAAGGGAAAGTCTTCACAGTTTCTGA 1107 0.4914 MASPQSHLPPGFRFHPTDEELILHYLRKKVASLPIPVSIIAEVDIYKFDPWDLPQKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVAALPGAGAAESMGVKKALVFYTGKPPKGVKTNWIMHEYRLINTTTNRSPKFQDPSSMRLDDWVLCRIYKKSKYVESPTAEAETLVADQDPPEEHIVLPSSQSPSPPPQNNLISQKSLSFSNLLDASDFSMLSSLLSDHYSTPPGFESSAAADDSNSKVINLDHQSFQNNHTNNSYDLFQRTPRLMNHSSLQNMENNTHKRQISGLDQEASYPSKRYLSSSCSFPNNNTNHQLDNPQWNFLLKQSLLNQQLILGPHLRNQALLRESLHSF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2014 368 Gene3D NAC domain 17 174 IPR036093 GO:0003677|GO:0006355
Alju03g2014 368 MobiDBLite consensus disorder prediction 179 212 - -
Alju03g2014 368 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Alju03g2014 368 FunFam NAC transcription factor 56 17 174 - -
Alju03g2014 368 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 285 - -
Alju03g2014 368 ProSiteProfiles NAC domain profile. 8 169 IPR003441 GO:0003677|GO:0006355
Alju03g2014 368 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2014 Alju-ChrAlju03 47700964 47702757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2014 4 359 NAC Transcription Factor Family AT3G04070 48.901 4.64e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g2014 NAM 7.4e-40 No_clan