LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju03g1985	ATGAGTCATGACTCAACAAGTGCCATTTCGTATTTAATCGGAGCTTCGAATCCGAGGGATGCGAGGGAATATCTGAACGAGCTTCTCACTCTTGGCTTTCACGCGCGGCCACAGCTAGCCAACTTCCTCATGGAACCGGAATCTGGAGCTTCGTCTTCTCGGAATCCTTCCCAGTTGTCATGGGTTAATCTCTCTAGGAGTCTAATATTAGCATATCAAAGCTTTGGCGTAGTATATGGAGATCTAAGTACATCACCTCTCTATGTTTTCACAAGCATATTTGGAGGAAAGTTGCAGAAGTACCATGATGAAGAAACTACCTTTGGTGCATTTTCATTAATTTTCTGGACCCTCACGTTAATTCCATTGCTCAAATACGTTTTCATCGTATTGAGTGCTGATGATAACGGTGAAGGTGGAACATTTGCTCTCTACTCACTGCTTTGCAGGCATGCCAAGTTTAATCTACTCCCCAACCAACAAGCGGCTGATGAGGAGCTGTCATCCTACAAATATGGTCCCTCATCACAGCCTGTAGCCCCTTCCCCATTGAAGAGGTTTCTGGAGAAGCACAAGAGGTTAAGAACAGTTCTACTTGTTGTAGTGTTGTTTGGTGCTTGCATGGTCATAGCTGATGGTGTGTTTACTCCAGCAATTTCAGTTCTATCAGCAGTATCAGGATTAGAAGTTACTGAGAAAAAGCTTTCTAATGGTGCACTTGTCTTGCTTGCCTGCGTCATATTGGTTGGTCTGTTTGCTCTCCAGCATTGCGGCACCCACAAAGTAGCATTTATGTTTGCACCAATTGTAATAATCTGGCTTGTATCCATTTTTTCTGTTGGTCTGTATAATACAATATGCTGGAATCCAAAAATAGTTCGGGGTCTATCCCCACACTATATCATCAAGTTTTTTATCAAGACTGGCAAAGAAGGTTGGATTTCTCTTGGAGGGGTTCTTCTCTGTATCACTGGATCTGAAGCTATGTTTGCTGATCTTGGTCATTTCACCGCTTTTTCAATAAGACTTGCATTTGCTCTTGTTATATACCCTTGTTTGGTGGTACAGTACATGGGCCAAGCTGCTTTCTTGTCTAAAAATCTTGGCTCTGTCAGTAACAGTTTTTATGACTCAATCCCAAAACCTGTATATTGGCCTGTCTTTGTTATTGGCACCCTTGCTGCTATTGTGGGGAGTCAGGCTGTTATAAGTGCCACTTTCTCCATTATCAAGCAGTGTCATGCACTAGGTTGCTTTCCCCGAGTGAAAGTTGTCCACACCTCAAAACATATATATGGACAGATCTATATCCCGGAAATAAACTGGATACTAATGGTCCTGACTCTTGCTATGACAATTGGATTTCAGGACACGACCTTGATCGGAAATGCTTATGGACTTGCTTGTATAGCTGTTATGTTTGTGACTACATTTCTGATGGCACTTATCATAATCTTCGTCTGGCAGAAAAGTGTATTGCTTGCTGCAATATTTCTTTTATTCTTTTGGGTGATAGAAAGCGCATATTTATCAGCAGCATTCATAAAAGTTCCTCAGGGAGGATGGGTTCCTCTTGTCTTGTCATTCATCATCATGATTGTTATGTATGTATGGCATTATGGTACTCGCAGAAAATACAGCTATGATCTACACAACAAAGTTTCATTGAAATGGTTACTAGGACTGGGCCCAAGCCTGGGCATCGTCCGTGTTCCAGGAATAGGTCTTATCTACTCAGAACTGGCAACAGGAGTGCCCGCAATATTTTCCCACTTTGTTACAAATCTCCCTGCATTTCACAGTGTGTTGGTATTTGTCTGTGTAAAATCAGTTCCTGTTCCATATGTCTCACCAGAAGAACGGTTCCTTATAGGGCGTGTTTGCCCCAGGCCATATCGTATGTACAGGTGCATCATCAGATACGGGTATAAGGACATCCAAAGGGATGACGGAGACTTTGAGAACCAACTCATACAAAGTATAGCCGAGTTTATCCAAATGGAAGCTACTCAGCCACAAGTTTCAAGTTCTGAAAGTTCTTCACTTGACGGGAGGATGGCTGTTATGAGTGTTAGAGGCATAGGATCTACTTCAAGCTTGATAGTGTCCGAGCATGAGGATGTTGGCCTGGACATCTCAATCCCTAGCAGCAAGTCTGTTACCCTGCGAAGCTTGCAATCAGTTTACGATGACGAGAACCCACAAGTCCGGAGGCGCCGAGTAAGATTCCAGCTGCCTAACAATCCTAGCATGGATCCTGCTGTTAGGGATGAGCTACTGGATTTGATTCAGGCTAAGGAGGCGGGAGTTGCATATATAATGGGGCACTCATACGTGAAGGCAAGGAAATCGTCCTCATTCTTGAAAAAGCTTGTGATTGATATTGGCTATTCCTTTCTTCGGAAGAATTGCAGGGGTCCTTCTGTGGCCCTTAACATTCCTCACATCAGTCTTATTGAAGTTGGAATGATATATTATGTATAG	2484	0.43	MSHDSTSAISYLIGASNPRDAREYLNELLTLGFHARPQLANFLMEPESGASSSRNPSQLSWVNLSRSLILAYQSFGVVYGDLSTSPLYVFTSIFGGKLQKYHDEETTFGAFSLIFWTLTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQPVAPSPLKRFLEKHKRLRTVLLVVVLFGACMVIADGVFTPAISVLSAVSGLEVTEKKLSNGALVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTICWNPKIVRGLSPHYIIKFFIKTGKEGWISLGGVLLCITGSEAMFADLGHFTAFSIRLAFALVIYPCLVVQYMGQAAFLSKNLGSVSNSFYDSIPKPVYWPVFVIGTLAAIVGSQAVISATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLAMTIGFQDTTLIGNAYGLACIAVMFVTTFLMALIIIFVWQKSVLLAAIFLLFFWVIESAYLSAAFIKVPQGGWVPLVLSFIIMIVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHSVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIIRYGYKDIQRDDGDFENQLIQSIAEFIQMEATQPQVSSSESSSLDGRMAVMSVRGIGSTSSLIVSEHEDVGLDISIPSSKSVTLRSLQSVYDDENPQVRRRRVRFQLPNNPSMDPAVRDELLDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV	827

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju03g1985	827	Pfam	K+ potassium transporter	72	645	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Alju03g1985	827	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	62	826	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Alju03g1985	827	NCBIfam	potassium uptake protein	70	827	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju03g1985	Alju-ChrAlju03	47491822	47498326	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju03g1985	44	827	Inorganic Solute Cotransporters	AT3G02050	78.454	0.0	1233