Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1984 ATGATGAACCCATTTTCATCGTCGTCATCCAAGGCCAAAAAGAAGCAAACGGCGACAACAAGCACAGCCACAGCAATGGCAACAACAACACAAGAGCAAAAACATGAAACGGCATGGGGAGGGAGGTACCTGGGTGTTCGGAGGAGGCCGTGGGGACGATACGCGGCGGAGATCCGAGACCCTTCCACCAAAGAGAGGCATTGGCTCGGCACCTTCGACACTGCTGAAGAAGCCGCGTTGGCCTATGACAGGGCAGCTCGGTCCATGCGCGGCTCACGTGCCCGAACCAACTTCGTCTACTCCGATACACCCCCAGGTTCTTCTGTCACCTCCATTATCTCCCCCGACGAACAATCCCATCAGAATCATGACTTCTCGTCTTTCTTCGCCCAAAATTCGCTCACCCAACAATCTTACCCAACTCCCCAACTCTCCGAATGCAATCTCTCCGACAGGCTCATAGCGTTTACGGATAGTAATGCTTGGTCTTCACCTTCATCTGGGGATTATAATTATCCACAACATCAAGTTGCAGCGACGGAGGGCCATAACCTAACACATTTCCAACAATTGTATGATGATAGCAACACTGAGCTTCCTCCATTGCCGCCAGATATTACCAGCTCCGCTGGATACGAAATGGGAAACGGGTTGTACGGTGACGAATTCGGGTATCCGGAGCAGAGCACCGTGACGTATACAAGCGGGGGATCGTACTCGTACACGGGCTTTGATTCGGCTGATTACGTGCATAGCCCGCTGTTCAGCACAATGCCACCGGTGTCAGATAAGGAGCCGGAGGGCTTTGATTTGGGGAATTCATCTTATTTCTTTGGAGAAAGTTTGTGTGATACTGTGATGCGAGGGAGAGAAGCGGAAGGCGACGAAAATGGTGATTTTGGTGTGTTTTTCGGCCTGGGCTTTTGTAGGGCCTGCCTTTTTGAAACTGGTTTCTTGTTGAATGAATGA 969 0.5108 MMNPFSSSSSKAKKKQTATTSTATAMATTTQEQKHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTSIISPDEQSHQNHDFSSFFAQNSLTQQSYPTPQLSECNLSDRLIAFTDSNAWSSPSSGDYNYPQHQVAATEGHNLTHFQQLYDDSNTELPPLPPDITSSAGYEMGNGLYGDEFGYPEQSTVTYTSGGSYSYTGFDSADYVHSPLFSTMPPVSDKEPEGFDLGNSSYFFGESLCDTVMRGREAEGDENGDFGVFFGLGFCRACLFETGFLLNE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1984 322 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Alju03g1984 322 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 164 - -
Alju03g1984 322 MobiDBLite consensus disorder prediction 1 36 - -
Alju03g1984 322 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Alju03g1984 322 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Alju03g1984 322 FunFam Ethylene-responsive transcription factor 2 42 100 - -
Alju03g1984 322 Pfam AP2 domain 43 91 IPR001471 GO:0003700|GO:0006355
Alju03g1984 322 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Alju03g1984 322 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Alju03g1984 322 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
Alju03g1984 322 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1984 Alju-ChrAlju03 47482166 47483213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1984 28 270 AP2-EREBP Transcription Factor Family AT5G13910 45.669 2.18e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju03g1984 AP2 2.3e-13 CL0081