Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1977 ATGAAGCTCTGGCTTTCTGAGATCCTGCCCCATCATTTGTCTGGTTCTTATATGTCAAGGAATCTTGCAGCAATAGTAGGAGGAGCTGCAGGAGCCGTGGCACTGGTAGGGATAGTTATACTACTCATCTGGTTTTGCCTGTCTCACAAGAGTGGTGTTTCTAGAAACTCAGAGACAGGGTCCTCTGATCCTTCACAAGTGGGAAGACATGGTGGGATAGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTCTCAGGCTACAAAAAATTTCAGTGACAAAAATCTGATTGGAGAAGGCAAATTTGGAGAAGTTTACAGGGGTTTACTTCATGATGGAATGCTTGTAGCCATCAAAAAGCGCCATGGATTCCCCAGTCAGGAATTTGTAGATGAGGTACAATTCCTCTCATCCATTCGACACCGAAATCTTGTAACTCTCCTGGGATACTGCCAGGAAAACAATCTACAGTTTCTCATATATGAATACGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGCTCAACAATCACGTGAGAAGCTGGAATTCAAGCATAGGCTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTAGCTCATCTTCACTCCTTGAGCCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTCGTGGATGAAAACTTCATCCCTAAGGTTGCCGATGCAGGGCTTCGCAACTTCCTCGGAAGAGTTGAAATTGGAGGGCCATCTTCTCAAGTTGCAGCAGATGAAATCTTCCTTGCTCCTGAAGTGAGAGAATTCAGAAGATATTCTGAAAAGAGTGATGTGTACAGCTTCGGGGTATTTTTGCTGGAACTGTTAAGCGGGAGGGAAGCAACTGGATCATCATCTTCAGACTCAAATCAGAATCTAGTTGAATGGGTGCAAAGGAAGCGAGAGCATGGGATTATAGCAAACATAGCTGATGAAAGAATGGGAAGCAATTATACAGCAGAAGGCATGGAAGAGTTTATGTCACTGATAGTCCCATGTATTGATATTTCAAGTGAGAGACGACCTGCGACGAGCTATGTGGTGATGGAAATGGATCGAATACTTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAGGAACCCCAATTGTGACCCTTGGAAGCCAATTATTTAAAGCTACAAAATAA 1191 0.4374 MKLWLSEILPHHLSGSYMSRNLAAIVGGAAGAVALVGIVILLIWFCLSHKSGVSRNSETGSSDPSQVGRHGGIELTVRDARRFEIEELSQATKNFSDKNLIGEGKFGEVYRGLLHDGMLVAIKKRHGFPSQEFVDEVQFLSSIRHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAAQQSREKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIPKVADAGLRNFLGRVEIGGPSSQVAADEIFLAPEVREFRRYSEKSDVYSFGVFLLELLSGREATGSSSSDSNQNLVEWVQRKREHGIIANIADERMGSNYTAEGMEEFMSLIVPCIDISSERRPATSYVVMEMDRILEKERNLTTVMGEGTPIVTLGSQLFKATK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1977 396 Gene3D Transferase(Phosphotransferase) domain 1 168 382 - -
Alju03g1977 396 Pfam Protein tyrosine and serine/threonine kinase 99 362 IPR001245 GO:0004672|GO:0006468
Alju03g1977 396 Gene3D Phosphorylase Kinase; domain 1 61 167 - -
Alju03g1977 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Alju03g1977 396 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Alju03g1977 396 FunFam Protein kinase superfamily protein 60 167 - -
Alju03g1977 396 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 31 371 IPR047117 -
Alju03g1977 396 FunFam Protein kinase superfamily protein 168 381 - -
Alju03g1977 396 ProSiteProfiles Protein kinase domain profile. 95 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju03g1977 396 SUPERFAMILY Protein kinase-like (PK-like) 81 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1977 Alju-ChrAlju03 47383316 47386077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1977 21 390 Receptor kinase-like Gene Family AT3G46290 35.115 3.35e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Alju03g1977 PK_Tyr_Ser-Thr 2e-40 CL0016