Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1971 ATGAAACCAGCGACTGTCCGTTACTGCATCACTCTTCCTCTACCCCAACCTGTCTGTTACCGGAGGCTTTTGGACCAGCTATTTATGGGGGCGCAATCGTTGAACCGTGTTAGTCCGAATCAGAGTCCTATTGCTAACGCTGAGCTGGGTGCTGAGATGGGTCGTCGTCATTCCGTGGTTTCGACCCCCAAGCGTAATGTTGTATCGAATGGTCATATATGTGACAAGAGTGAAGAACCAAATGGTTCAAAAAATTCGCCAATTCAGAGAAGAACCAGTCCTCGAATACAAGCCAAGCAAAAAGTGGATACGGAACTTCCAGTGCGCTGCGGAGATGAGCTGCACAATGAATCTAGTGATGCGAAGATGAGTACCTGTAAAACAAGTGTTAACTACGAAAATGTGGATAAGCAACAGGTAGTTGGAGGGAGAACTAAAAATTTGGGTAATTCAACAACTAAGGAACCCCAAGAGCCTAAGAAGTCTTTAATACAGAGGAGAACTAGTCCTCGAATCCAAGCCAGGCAAAAGGTGGATAAGGCAATTCCAGTGTCCAGGAGTGGTCAGCTGTCTACCAGCGATATGAAGAATACAGCCTGCAAAAGAAGTCGCAATGACGAAAATGGTTGTAAGGAAAATACTGTGGAGGACCAACAGAAAGCTAAGAAATTGAACGAGTCAATTACTGAAGAGCCTAGTGAGGACAATGAATCGTCAGCTCAAAGGATAGCTAACTCTCGAGTTCAAAGTAAGGAATTACTAGTTCGACGTAGAGTAGAGTTATTAGAGGACCGAGATAACACTGGTAATGATAACAAAAGTAAGTGTTTCAAAAGAAGTTGCAATGATGAAAATGGGGATAAACATGGGGGTAAGGAAGGGGGAGTAGGCAATTCACCTAGAGTAAAGAAGCTGAAAGAGGCTACCTTGGTCCATAACAAACGGACATCCAGGGGGTCGAAAGCTAATGGGGCAGGGACTTTGGCAGATAAAAGTGACTCTGTCAAGGTGAAAGAAACGCTGAGGTTGTTTAACAAGCATTATCTTCATTTTGTGCAGGAGGAGGAAAAGAGGTGTAACAAAGTGGGATCTTCCCTCAAAGTGTCTAAAGGAGGTTCAAAATCTAAGGAGGAAGAGAAGAGGCGTAACAATGTGAAATCTTCCCCTAAAATGTCTAAAAAAGGTTCAAAATCTAAGAAAAATGCAACAGTTGATGTTGAAAAGTCAATGACTAAGCGACCTGATTTGAAAGCATTATCCAAGATGTTGGAAAATAAGGAGATACTGTATCCTGAGAAAAGAATTTGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCACGCGCTGAAATGGCTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGCATAGATTATATGGGTCAAGCTTATTCCAAAGTGTCACAGTACAGTCACTATAAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGTATGTATGAGGATGATGTTGATAATGCTGAGGACGTTGTATATACTGGTCAAGGTGGGCAGAATTTGACTGGTGATAAGCGTCAAATTGGGGATCAGAAGTTAGTGCGGGGTAATTTGGCTTTGAAGAACTGCATGGAGCAACGTGTGTATGTAAGGGTGGTTCGTGGCCATGAATCTTCTAGCAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAATTATTGGGCAGAAAAAGGATATTCTGGTTTTACGGTCTACAAGTTTCGGCTGAAAAGGCTTGATGGGCAGCCAATCTTGACAACTAACCAGGTGTATTTCATTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAAGACATCTCCAATGGTGAAGAAGAGGTGCCTATTCCTGCCACTAACCTGATTGATGACCCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAATCAAATTTGCTTTCAAAGAACGTAAAGCTCCCCACAGCTGTCACTGGATGCAATTGCAAAGGCTTATGTGTGGATCCTACATCCTGTGAATGTGCTTTACGAAATGGATCTGATTTCCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATGTTGTCTTTGAATGTGGGCCAAAATGTGGATGTGGTCCTGGTTGTGTTAATCGAACTTCTCAAAGAGGACCGAGATATCGTCTTGAGGTTTTTCGTACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATCACATACCTTCTGGAGCACCAGTTTGTGAATACACAGGATTACTCAGGAGGACAGAAGATGTAGAGAATACACTCGAGAACAACTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAAGGAAACATCTGCAGCAGTCAAGCTCTTGGACAATTATGCAGATGACGATTCTGAATCCATACCAGAGTTTTGTATTGATGCTGGATCAACCGGAAATATTGCTCGATTCATTAACCATAGTTGTGAACCTAATTTATTTGTTCAGTGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGCTATTTGCTGCAGACAACATACCACCCTTACAGGAGCTTACATATGACTATGGTTATGCCCTTGATAGTGTCTTGGGTACTGATGGGAAAGTGAAGAAAATGGCGTGTTATTGTGGAGCTGCTGACTGCAGGAAGCGACTATTCTAA 2745 0.4262 MKPATVRYCITLPLPQPVCYRRLLDQLFMGAQSLNRVSPNQSPIANAELGAEMGRRHSVVSTPKRNVVSNGHICDKSEEPNGSKNSPIQRRTSPRIQAKQKVDTELPVRCGDELHNESSDAKMSTCKTSVNYENVDKQQVVGGRTKNLGNSTTKEPQEPKKSLIQRRTSPRIQARQKVDKAIPVSRSGQLSTSDMKNTACKRSRNDENGCKENTVEDQQKAKKLNESITEEPSEDNESSAQRIANSRVQSKELLVRRRVELLEDRDNTGNDNKSKCFKRSCNDENGDKHGGKEGGVGNSPRVKKLKEATLVHNKRTSRGSKANGAGTLADKSDSVKVKETLRLFNKHYLHFVQEEEKRCNKVGSSLKVSKGGSKSKEEEKRRNNVKSSPKMSKKGSKSKKNATVDVEKSMTKRPDLKALSKMLENKEILYPEKRICDIPGIKVGHQFYSRAEMAAVGFHSHWLNGIDYMGQAYSKVSQYSHYKFPLAVAIVLSGMYEDDVDNAEDVVYTGQGGQNLTGDKRQIGDQKLVRGNLALKNCMEQRVYVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGYSGFTVYKFRLKRLDGQPILTTNQVYFINGRAPQSIAEIRGLVCEDISNGEEEVPIPATNLIDDPPVAPTGFKYKKSNLLSKNVKLPTAVTGCNCKGLCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPKCGCGPGCVNRTSQRGPRYRLEVFRTAKKGWAVRSWDHIPSGAPVCEYTGLLRRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQKETSAAVKLLDNYADDDSESIPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGTDGKVKKMACYCGAADCRKRLF 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1971 914 MobiDBLite consensus disorder prediction 360 409 - -
Alju03g1971 914 SMART set_7 734 890 IPR001214 GO:0005515
Alju03g1971 914 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 213 907 - -
Alju03g1971 914 MobiDBLite consensus disorder prediction 80 95 - -
Alju03g1971 914 MobiDBLite consensus disorder prediction 68 125 - -
Alju03g1971 914 ProSiteProfiles YDG domain profile. 436 591 IPR003105 -
Alju03g1971 914 ProSiteProfiles SET domain profile. 734 884 IPR001214 GO:0005515
Alju03g1971 914 SMART G9a_1 431 595 IPR003105 -
Alju03g1971 914 MobiDBLite consensus disorder prediction 371 386 - -
Alju03g1971 914 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 104 914 IPR025794 GO:0016571
Alju03g1971 914 Gene3D - 419 607 IPR036987 -
Alju03g1971 914 MobiDBLite consensus disorder prediction 199 230 - -
Alju03g1971 914 SUPERFAMILY PUA domain-like 418 604 IPR015947 -
Alju03g1971 914 Gene3D SET domain 615 914 IPR046341 -
Alju03g1971 914 SUPERFAMILY SET domain 619 891 IPR046341 -
Alju03g1971 914 ProSiteProfiles Pre-SET domain profile. 669 731 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju03g1971 914 ProSiteProfiles Post-SET domain profile. 898 914 IPR003616 -
Alju03g1971 914 MobiDBLite consensus disorder prediction 137 246 - -
Alju03g1971 914 Pfam SAD/SRA domain 436 595 IPR003105 -
Alju03g1971 914 MobiDBLite consensus disorder prediction 265 291 - -
Alju03g1971 914 MobiDBLite consensus disorder prediction 137 158 - -
Alju03g1971 914 Pfam SET domain 745 884 IPR001214 GO:0005515
Alju03g1971 914 Pfam Pre-SET motif 625 726 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju03g1971 914 MobiDBLite consensus disorder prediction 105 120 - -
Alju03g1971 914 SMART preset_2 622 718 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju03g1971 914 MobiDBLite consensus disorder prediction 265 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1971 Alju-ChrAlju03 47322804 47339324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1971 422 914 EF-hand Containing Proteins AT5G13960 67.475 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju03g1971 SAD_SRA 9.4e-48 CL0178