Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1967 ATGACCGTTCTTGGTTTGCTCTGTCAAACGAAGAGAAACAATCTGTCTAGACCTGACAAGTATTGTTTTCGTGTAAACTTTGGTAAAATCATGCGCCACTTTGCAACATTGGAGGGGAGGGGGCTCTTTCCTTCATTTGGTTTAAATTTTAAACTGGGGGGGGATTTTATGTTAAATTCCATTCCCTCTTTTTATTTTGTTGGTTTAGTAACTGAAGTTAGCTGTGGCTGTTTACACCGACGAAACTCCCCCTTCCCTTCCAAAATTTTCATGTCCATCTTGCCCTCACAAGCTCAGGCATCAACCTCGTCGTCATCTCAGCCTCCGATATCTCCAAACCCTAATTCCCAACATGGAAACCTCTCTCTCGCGTCTCATTCTCCTCCATCCCTCTCCTCTCCTCCCCTTCAAGTTCCATCATTCGGATCTATCCGGATCTCCGATGCACCATCTCTCGTCGCTATGCCCGACGTCAATTCAGGTCCATCGACTCCAGCTACAGAAGATTCTGGTGGACCTTCCGAAAAGGTGACTGGGTTGGGATCTCCAAGTGTTATGAATATTTCACCTCACCAAAACTCCAGAGTGCATTCCCATAGTCAGTCAAGAAGAAGGGCCACTAGATCATCATCCCAGTCTGGAGGGAAGATGACAGGAACAGTTTCTTCTGGAGATCAGCAAAATACTAGGTCCTTCAATCCTCATGGGAGCACCCCTTTTGCAGGAAGAAAATCTCAGATGGTTAATGGTAATCACTTGCTGAACTTTCATTATGATCCCGTATCTCGTCCAACAAGGGGTCCTCCTCCTCCACTACCAAGAAGGCAGCAGAAGAAAAAGCCATACAACAAAGATTTATTTTTACAGGCAAATTATAAATTTGTGGTGTTAGATTCAGGAGACTATTCACCAGAGGCTTTGGACCCAGATAAAATGCTACAGTGGGAAGATATTGTGTGTGTGAGGTATTCCACTCCATTCTTGGTTCAGTGTCCAATTTGTTTGGAGTATCCACTTTGTCCGCAAATAACATCTTGTGGACATATTTTTTGCTTCCCTTGTATCTTACAATATTTGATGATGGGTGAAGAGGATCATAAAGGTGATTGCTGGAAAAGGTGTCCCCTATGTTTTGTCATGACATCTGTGAAGGATTTATATACCATCTACATTGAGAATGTTGAGCAGTATCAAGTGGGAGATATCATGGAGTTCAGACTTTTAACTCGGAAAAAGGACTCTTTTACTCTGTCTGATAAAAATAAGGAGACGGATGTCTTATTATGTGGCGATAATAATTTATGTGACCCATTTTCTAAGTTCACACTCACATCAGATGTAGATCTCTCAGTGAGACAGGCAATATCGGATCTAGATGGCTGGCTAGCTAAAGCTGATTCTGGTCTTGTTGATGACTTGGAGAAACTTCCATATGTTTGTGCTGCGATGCAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACAGGGCTTGTGATGTTGGAAAATCCTCTAGGCTTATTGATTGTGGACATCACAAACAATCAACAGTTGTAAATGGCACTGATGTTGATGATGAAACCCGGTCTTCTGGATCAGGATCTTCCTCTACAGATTTCCGCGACCCAAGCAAGGGTATAATAATGGAAAATTCAAAGGCAAGAGTCTGTCCAGATCAAACTTTGGATGTGGAGAAGAAAGTATTAGATCAAGAAATTAATCTATCTTCTTCCTATGAGGAGAAAAATGATATCCAAAGGCATCCAAATGGTTTTGCAGATTCAAAGGAGAGTGACTCGTATAATTTTTATCAGGCTGCTGATGGTCAGCGTCTCATTCTTCATCCCCTGAACATGAAGTGTCTTCTTCACCATTATGGAAGCTATGATATGCTTCCACACAGGATAAGTGGTAGGATTCTGCAATTGGAGACAGTCACTCAGTCAGAGGCAATGAGGAGGCGGTACCGATATTTGAGTCATTTTCCTTTAACAACAACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATGCTGCCCTCTGAATCCCTGGCCCCATTCATGGACGAATTAAAGAAGCGTGCAAACCAGAGGAGGCATCTTGCAAAGAAGGAACGAAAAGAGAAAATCAAGGCTGAAGCTGCTTCTACGCATTCTATTCCCATACCAACCAGTTCTCAGCTGATGTCTCGTGACAATTCTCCACCATTCTCCATGGATGATTTTGAAGCTTTGGGGAATTCAGCCGTATCTTCAAGTCCTCCTGTTGTTGGGGGGAGAAGTTTGTTTTCAAGTGTCACAAGACTTGGTTTTGCTGCTGGTCATGATTCTCCATCCTTGAACATTCAAGAAACTAATGGTAATCATAATATGACAACTGATTCGTCTGGCTTGACAGGTCTGAGAAATGTGGAGACATCGTCATTTGCCAATGTTATATCTAGGGCAGAGTCTATTAGTAGCTTAAATGCACCCAAGACAAATGACTTGAGTAAGAAGGGGAAGAAACCAACTAGAGTTCTTCTGTCAACAGCCGGGGGCAGGCGTTACTGA 2553 0.4258 MTVLGLLCQTKRNNLSRPDKYCFRVNFGKIMRHFATLEGRGLFPSFGLNFKLGGDFMLNSIPSFYFVGLVTEVSCGCLHRRNSPFPSKIFMSILPSQAQASTSSSSQPPISPNPNSQHGNLSLASHSPPSLSSPPLQVPSFGSIRISDAPSLVAMPDVNSGPSTPATEDSGGPSEKVTGLGSPSVMNISPHQNSRVHSHSQSRRRATRSSSQSGGKMTGTVSSGDQQNTRSFNPHGSTPFAGRKSQMVNGNHLLNFHYDPVSRPTRGPPPPLPRRQQKKKPYNKDLFLQANYKFVVLDSGDYSPEALDPDKMLQWEDIVCVRYSTPFLVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDCWKRCPLCFVMTSVKDLYTIYIENVEQYQVGDIMEFRLLTRKKDSFTLSDKNKETDVLLCGDNNLCDPFSKFTLTSDVDLSVRQAISDLDGWLAKADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEHRACDVGKSSRLIDCGHHKQSTVVNGTDVDDETRSSGSGSSSTDFRDPSKGIIMENSKARVCPDQTLDVEKKVLDQEINLSSSYEEKNDIQRHPNGFADSKESDSYNFYQAADGQRLILHPLNMKCLLHHYGSYDMLPHRISGRILQLETVTQSEAMRRRYRYLSHFPLTTTFQLCEIDLSEMLPSESLAPFMDELKKRANQRRHLAKKERKEKIKAEAASTHSIPIPTSSQLMSRDNSPPFSMDDFEALGNSAVSSSPPVVGGRSLFSSVTRLGFAAGHDSPSLNIQETNGNHNMTTDSSGLTGLRNVETSSFANVISRAESISSLNAPKTNDLSKKGKKPTRVLLSTAGGRRY 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1967 850 PANTHER RING FINGER 10 FAMILY MEMBER 191 850 IPR039739 -
Alju03g1967 850 MobiDBLite consensus disorder prediction 100 140 - -
Alju03g1967 850 Coils Coil 688 708 - -
Alju03g1967 850 MobiDBLite consensus disorder prediction 157 171 - -
Alju03g1967 850 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 325 392 IPR013083 -
Alju03g1967 850 SUPERFAMILY RING/U-box 330 382 - -
Alju03g1967 850 MobiDBLite consensus disorder prediction 100 280 - -
Alju03g1967 850 SMART ring_2 331 377 IPR001841 -
Alju03g1967 850 ProSitePatterns Zinc finger RING-type signature. 346 355 IPR017907 -
Alju03g1967 850 MobiDBLite consensus disorder prediction 180 196 - -
Alju03g1967 850 Pfam Zinc finger, C3HC4 type (RING finger) 331 377 IPR018957 GO:0046872
Alju03g1967 850 MobiDBLite consensus disorder prediction 205 252 - -
Alju03g1967 850 MobiDBLite consensus disorder prediction 518 545 - -
Alju03g1967 850 ProSiteProfiles Zinc finger RING-type profile. 331 377 IPR001841 -
Alju03g1967 850 FunFam RING finger protein 10 324 392 - -
Alju03g1967 850 MobiDBLite consensus disorder prediction 518 542 - -
Alju03g1967 850 CDD RING-HC_RNF10 329 386 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1967 218 786 C3H Transcription Factor Family AT3G26730 56.218 0.0 636