Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1966 ATGGATGGCATAATGCCAAAGGACCGCCAAGAAATGGAAGCAGTTAAGGAAATGATAGCGAGGGATGATCATATAGCTGCTAGAGATAAATTACTACAACTACAACGAGAGTTTCCAGCCATTGATGAATTCTCAAGTTTGATTACTGTTTGTGAGGTTTTAAACTCAGCAAGTCATGATTTCATACCCAGCGAAAGCGACTGGTACTTGATTCTTCAAGTCCCACAAGCAGCTTCCCAACAAGATGTGGAGTTCCAATATAATAAAATTTCAAACCTTTTAAAACCTATTAAGACCCACACCCCTGCAGCTGAATCTGCTCTGGAAATCGCTGAGGAAGCATACTCCGTACTTTCAAACCCAGAAAAGCGAACAGAGTTTGATAAGAAGAGGAACGCCATGTTCGAAGCTTGTGAAGTCCTGAATGTTCAGCAAATACCTTCAACTCCTTCAAAGTCAGAAATGGACAACGTGTTCGATTACAAAAATTCTCAACTTTTTAAAGTTGGCCAAGTTTGGGCTGCAAATGATCATGAATGCATGCCAAGAAACTACTTTCGGATTAAAGAGATCGAGAAGAGCCCACTAAGATTACATGTTAATTCTTTAAGAGCTGCTCAACTCTCTTCATACGAGTTGTTCAGAAGCGAGGCGTGCTTGACTATTGTTTGTGGGCAATTCAATGTAGATAAAAGTAAGGATCAAATAATTGTTCCAGCAGTTCTTTCACACGTTGTTTGTAGTTATGCCGATGAGCAGGTCCTAATCTTCCCAAAAGAAGAAGAGGTTTGGGCAATGTACAGAGGGTTAGATCCTATGATAAAGCGCTCAAATGATGAAGCTAGGAAAAGCTCCAAGCTAGAAGTGGTTGAAATCGTTACAGGATATACTGATACAGGAGACATGCTTGCTGCAAGATTGGTCAAAGTAGATGGACAAAAAAATGTCTTTAGAAGACAAAAGGAGAGTTGCCAAGAGCAGTTTTTATCAATTCCTTCAGATAATCTATACAAGTTTTCTCACAGGATTCCGGCACACAGATTTGTTGGGGAAGACATGGATGGCATGTTTGAGCTTGATCCATCTGCAGTTCCCTCTGGTCTAGACTGCCCTCAGTCAATGACAAGCAAGGAGCGATCAGATTCAGAATCAAAATCACTTGACCCTGAAAATAAATTGTCCTTGAAAGATTTTGCTTGCAATCAAATATGGGCTGTGCGTACTAATGTAGAAGTTATTCCTCGGAGATATGTTATAGTGAATAATGTGGCTTCAGAAGGTGAGATCTGTGTGACATTCTTAGAGCATAATCTCACTTGTACTGATGAGAAACACTGGATGGAGCAAGGCCTACCAATTGGCTGTGGTTCATTCAGTGCAGGTAAGACCATTGGAATATTGGGGCTATATCACTTTTCTCATTTAATGAAGTGTGAGCGAAACCAAGAAGATTTCTCCTTCGTAATATACCCACAGAAGGGTGAGGTTTGGGCTAGGTACAAGAATTGGAATGGCAAATGGGATCAATCAGACCTCGCTTGTTATCAATATCAGATTGTTGAGATTATTTCAGATTTAGCTCATGGTTCTGATGAGATCGCTGTGGTCAGCTTAATTGAGGTGCCTGGTTTTATGACTCTGTTTCGAAGGCAACGTTATAATGGTTGA 1668 0.4053 MDGIMPKDRQEMEAVKEMIARDDHIAARDKLLQLQREFPAIDEFSSLITVCEVLNSASHDFIPSESDWYLILQVPQAASQQDVEFQYNKISNLLKPIKTHTPAAESALEIAEEAYSVLSNPEKRTEFDKKRNAMFEACEVLNVQQIPSTPSKSEMDNVFDYKNSQLFKVGQVWAANDHECMPRNYFRIKEIEKSPLRLHVNSLRAAQLSSYELFRSEACLTIVCGQFNVDKSKDQIIVPAVLSHVVCSYADEQVLIFPKEEEVWAMYRGLDPMIKRSNDEARKSSKLEVVEIVTGYTDTGDMLAARLVKVDGQKNVFRRQKESCQEQFLSIPSDNLYKFSHRIPAHRFVGEDMDGMFELDPSAVPSGLDCPQSMTSKERSDSESKSLDPENKLSLKDFACNQIWAVRTNVEVIPRRYVIVNNVASEGEICVTFLEHNLTCTDEKHWMEQGLPIGCGSFSAGKTIGILGLYHFSHLMKCERNQEDFSFVIYPQKGEVWARYKNWNGKWDQSDLACYQYQIVEIISDLAHGSDEIAVVSLIEVPGFMTLFRRQRYNG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1966 555 CDD DnaJ 67 120 IPR001623 -
Alju03g1966 555 Gene3D DnaJ domain 62 141 IPR036869 -
Alju03g1966 555 Pfam DnaJ domain 67 128 IPR001623 -
Alju03g1966 555 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Alju03g1966 555 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Alju03g1966 555 Pfam Domain of unknown function (DUF3444) 153 351 IPR024593 -
Alju03g1966 555 Pfam Domain of unknown function (DUF3444) 383 552 IPR024593 -
Alju03g1966 555 PANTHER ENDOSOME ANTIGEN-LIKE PROTEIN, PUTATIVE (DUF3444)-RELATED 6 135 - -
Alju03g1966 555 MobiDBLite consensus disorder prediction 367 389 - -
Alju03g1966 555 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1966 Alju-ChrAlju03 47285625 47287430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1966 8 135 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.007 6.20e-09 56.2