Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1953 ATGATGATGGATCAGGGAGAGAAGCTGCTTCTTCGCAAAAACGAGGCCTCTGATTTCGTGGCAGGTGTTGACGCTGAGCTTGGCCTTGTCACCGTGCCACCAGGCACCCACAATATTACTCCTCCCGGGTCGGGTCCTCCTGCTCCGATCCGAGACCTCGGCTTCGTCGCTGCCTTTCACACCGTTCATAGGAAGAAACGGATGGCCCGCCAGAGGAGGTCCTCCGCCGTCTCCATGAATCTTCTTCCGCCACCTCCTCCTCCTTCCTCCTCGCACGTGCCTATCTCCCCGCTTCGATCTTACAATCCTCTCCCACCCCCACGTGAGATTGATCACCAGAGGTTGAGATTTCTTTTCCAAAAGGAGCTCAAGAACAGTGACGTAAGCTCCCTCCGAAGGATGGTGCTCCCAAAGAAAGCAGCAGAGGCTTTCCTTCCTATCCTTGAGTCTAAAGAAGGAATTGTTATAAGCATGGATGACATAGATGGTCTTCATGTCTGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAACAGTCGGATGTATGTACTTGAAAACACTGGGGAATTTGTTAGCACACATGGCTTACGACTTGGAGATTCCATAGTGGTTTATCAGGATAATCAAACCCTTAATTATGTGATTCAAGCTAAAAAGGCTTCTGAGCAAGATGATTTTATGGCTATATCTAGTGACAACATCAATGATCTCTTTCTGCAAGACTATGAGGTTAACAAGTCAAATGGTTTGAGTGTGATGACCTATCCCACAATGAATGACACAAACATGTCATTCATCTATGACACTACATTCTCAAATGATTCTCCATTTGACTTTTTGGGTGGATCGATGACCAGTTTCTCAAGAATTGGATCCGTTGAAACTTTTGGCTCTGTCGAGAATTTGTCACTCGATGACTTCTATTAA 927 0.4639 MMMDQGEKLLLRKNEASDFVAGVDAELGLVTVPPGTHNITPPGSGPPAPIRDLGFVAAFHTVHRKKRMARQRRSSAVSMNLLPPPPPPSSSHVPISPLRSYNPLPPPREIDHQRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSIVVYQDNQTLNYVIQAKKASEQDDFMAISSDNINDLFLQDYEVNKSNGLSVMTYPTMNDTNMSFIYDTTFSNDSPFDFLGGSMTSFSRIGSVETFGSVENLSLDDFY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1953 308 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Alju03g1953 308 CDD B3_DNA 117 219 IPR003340 GO:0003677
Alju03g1953 308 Pfam B3 DNA binding domain 119 217 IPR003340 GO:0003677
Alju03g1953 308 Gene3D - 115 235 IPR015300 -
Alju03g1953 308 SMART B3_2 119 221 IPR003340 GO:0003677
Alju03g1953 308 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 62 225 IPR044800 GO:0003700
Alju03g1953 308 MobiDBLite consensus disorder prediction 67 94 - -
Alju03g1953 308 MobiDBLite consensus disorder prediction 80 94 - -
Alju03g1953 308 SUPERFAMILY DNA-binding pseudobarrel domain 117 216 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1953 Alju-ChrAlju03 47215601 47218661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1953 64 308 B3 DNA Binding Superfamily AT3G26790 54.513 4.54e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju03g1953 B3 7.4e-16 CL0405