Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1942 ATGGAGATGCTTCCAAGCCTTGCTGTTAATGGTGGCGTGAAACTGCCTGTTGGTTTCAGGTTCTGTCCCACCGACGAAGAACTCATCGTTCACTATCTCAGAAAGATGGCACTTGGTCTGCCATTACCCGCGTCTGTGGTTCCTGTTCTCGATGTGTTTCACACCGATCCTTGGAAGCTTCCAGGTGTGGGCGACGCGGATTCCATGGAAAAGGGGTATTTTTTCAGCGAGAAGAATGATATTTTCTATGGAGGCATAATCGTGATCGCTGAGGGCACTGGCTTCTGGAAGCCCGTCGGGGACGAGATACCAATTGTTTGTCCTCGGACCAACCTGGTGATCGGTACTCGGAAAACCCTGGCTTTCTGCGGCGGCGACACCGAAACCCACTGGGTTATGCATGAACTTCGCCTCGCCGGCCCTGCAATGAATGTTTACCCACCCAAGATTCTGCCTTGGACGAAGTGGGCCGTGTACCGCGTTTTTCAGGAGGAGACGGAGAAGAAGAAGAAGAAGAAACCCAAGGAAAAAAGGTCTATGAAGAAGAAGTCGACCAAGAACAAAAAAATTCGGAAGCTTGAGGCTGATGAGGGAGTCAAACCCAGTGTCATCGATTTTGCCGCTGATGGCAACGATTCCGGCGAGGCCCCACCGCCGCCGCCGCCGGCGTCTCCGAGTCTCAGTGAAGGCAGTGATATCACCTCATCTAACTAG 714 0.5252 MEMLPSLAVNGGVKLPVGFRFCPTDEELIVHYLRKMALGLPLPASVVPVLDVFHTDPWKLPGVGDADSMEKGYFFSEKNDIFYGGIIVIAEGTGFWKPVGDEIPIVCPRTNLVIGTRKTLAFCGGDTETHWVMHELRLAGPAMNVYPPKILPWTKWAVYRVFQEETEKKKKKKPKEKRSMKKKSTKNKKIRKLEADEGVKPSVIDFAADGNDSGEAPPPPPPASPSLSEGSDITSSN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1942 237 Pfam No apical meristem (NAM) protein 16 138 IPR003441 GO:0003677|GO:0006355
Alju03g1942 237 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Alju03g1942 237 MobiDBLite consensus disorder prediction 167 237 - -
Alju03g1942 237 Gene3D NAC domain 24 170 IPR036093 GO:0003677|GO:0006355
Alju03g1942 237 MobiDBLite consensus disorder prediction 172 188 - -
Alju03g1942 237 PANTHER NAC TRANSCRIPTION FACTOR 56 15 183 - -
Alju03g1942 237 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1942 Alju-ChrAlju03 47087210 47088205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1942 7 206 NAC Transcription Factor Family AT5G13180 34.906 6.73e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju03g1942 NAM 5.7e-23 No_clan