Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1924 ATGTTCTCTCCGACGATAGCCACTTTTCTATGCCTAATTCGTGAGATTAAACTTGAGGAAAGCAGTTTAGCTCGAGTTAGTCATATTGAGTATGGGTCATGCAAGTTTGAGTTAATGACTTCGACAGCAGCGGGATCAGCAGCAATGGCTCCCAAAAGAGGTGTGAAAGCTCCTGTTGCAGCCGCTAAGAAGAAGCAGCAAGTCGTCAACCCACTTTTCGAGAAGCGTCCAAAGCAATTCGGGATCGGAGGTGCGTTGCCTCCTAAGAGAGACCTTACTCGATTCGTAAAGTGGCCAAAGACTGTTCAAATCCAGAGGAAGAAGAGGATCCTCAAGCAAAGGTTGAAGGTCCCCCCAGCACTGAACCAGTTCACCAAAACACTGGACAAGAATCTCGCAACTAGCTTGTTCAAGATGCTCCTTAAGTACAGGCCTGAAGATAAAGCTGAGAAGAAAGAGCGACTCCTGAAGAGGGCTCAGGCAGAAGCAGAAGGAAAATCTACTGAAGCTAAGAAACCTATTGTTGTAAAATATGGTTTAAACCATGTTACTTACCTTATTGAGCAGAATAAGGCACAGCTGGTTGTGATTGCGCATGATGTAGACCCAATTGAACTGGTTGTCTGGCTGCCAGCATTGTGCAGGAAGATGGAAATTCCCTACTGCATTGTTAAGGGCAAGGCACGATTGGGAACGATCGTCCACAAGAAAACTGCATCAGTTTTGTGCTTGACAACAGTTAAGAATGAAGACAAACTAGAATTCTCTAAGATTCTAGAGGCGATCAAGGCCAACTTCAATGACAAATATGACGAATACAGGAAGAAGTGGGGTGGTGGTATCATGGGTTCTAAATCCCAAGCCAGAACCAAGGCCAAGGAAAGGCTCCTTGCCAAGGAAGCAGCACAGAGAATGACTTGA 921 0.4549 MFSPTIATFLCLIREIKLEESSLARVSHIEYGSCKFELMTSTAAGSAAMAPKRGVKAPVAAAKKKQQVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKSTEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1924 306 FunFam 60S ribosomal protein L7a 98 281 - -
Alju03g1924 306 ProSitePatterns Ribosomal protein L7Ae signature. 214 231 IPR004037 GO:0042254|GO:1990904
Alju03g1924 306 SUPERFAMILY L30e-like 136 277 IPR029064 -
Alju03g1924 306 Coils Coil 149 169 - -
Alju03g1924 306 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 90 282 - -
Alju03g1924 306 PRINTS Ribosomal protein L7A family signature 265 285 IPR001921 -
Alju03g1924 306 PRINTS Ribosomal protein L7A family signature 138 151 IPR001921 -
Alju03g1924 306 PRINTS Ribosomal protein L7A family signature 172 192 IPR001921 -
Alju03g1924 306 PRINTS Ribosomal protein L7A family signature 94 111 IPR001921 -
Alju03g1924 306 PRINTS Ribosomal protein L7A family signature 233 257 IPR001921 -
Alju03g1924 306 PRINTS Ribosomal protein L7A family signature 114 133 IPR001921 -
Alju03g1924 306 PRINTS Ribosomal protein L7A family signature 77 94 IPR001921 -
Alju03g1924 306 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 164 253 IPR004038 -
Alju03g1924 306 PRINTS Ribosomal protein L7A/RS6 family signature 211 221 IPR018492 -
Alju03g1924 306 PRINTS Ribosomal protein L7A/RS6 family signature 221 235 IPR018492 -
Alju03g1924 306 PRINTS Ribosomal protein L7A/RS6 family signature 195 208 IPR018492 -
Alju03g1924 306 PRINTS Ribosomal protein L7A/RS6 family signature 176 190 IPR018492 -
Alju03g1924 306 Gene3D - 98 281 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1924 Alju-ChrAlju03 46926834 46931309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1924 49 306 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 85.271 2.18e-167 463